Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0049 ATGGGGTCTGAATGTCCTCCAGCTACTGTAACTGTTCATGTTACAGGCTTCAAGAAATTCCATGGAGTTTCAGAGAATCCTACAGAGTCAATTGTCAATAACTTGACGGGGTATATGAAGAAGAAGGGTTTGCCTAAAGGTTTAGTTATTGGGAGCTGTAGCATTCTGGAGACTGCTGGTCAAGGAGCACTTGTTACCCTTTACCAGACTTTGCAATCTGCTATTAGCCCCAAGGATTCTGAATCTTCCAATTCCAACAAAATTTTATGGCTGCATTTTGGGGTTAACAGTGGAGCAACAAGGTTTGCCATAGAGCATCAAGCTGTCAATGAGGCTACTTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCAATTGTTCCTTCAGACGGCGGAATCATGCGAACACGTGGGAGCTCCCTTCCTGTAGAGGAGATTACAAAGGAATTGGCAAAGAAGGGTTATGATGTGATGACATCAGATGATGCTGGCAGGTTCGTGTGCAATTACGTGTACTATCATTCGCTTCGTTTCGCAGAGCAAAATGGGATAAAATCCCTGTTTGTGCATGTGCCTTCGTTCTTGACAATAGATGAGGAGACACAAATGCAGTTCATTGCTTCCTTGTTAGAGGTACTTGCTTCTTCAAGTTAG 663 0.4419 MGSECPPATVTVHVTGFKKFHGVSENPTESIVNNLTGYMKKKGLPKGLVIGSCSILETAGQGALVTLYQTLQSAISPKDSESSNSNKILWLHFGVNSGATRFAIEHQAVNEATFRCPDEMGWKPQKVPIVPSDGGIMRTRGSSLPVEEITKELAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPSFLTIDEETQMQFIASLLEVLASSS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0049 220 PIRSF Pyrrolidone-crbxlat_pptds 9 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele08g0049 220 Pfam Pyroglutamyl peptidase 12 196 IPR016125 -
Lele08g0049 220 Gene3D - 9 219 IPR036440 -
Lele08g0049 220 FunFam Pyrrolidone-carboxylate peptidase isoform A 9 219 - -
Lele08g0049 220 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 11 217 IPR036440 -
Lele08g0049 220 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 9 218 IPR016125 -
Lele08g0049 220 CDD Peptidase_C15 10 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0049 Lele-ChrLele08 316439 317915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2209 13 28494771 28495973 Lele08g0049 08 316439 317915 CCT
Lele15g0202 15 1179754 1181496 Lele08g0049 08 316439 317915 CCT
Lele16g0211 16 1185313 1187534 Lele08g0049 08 316439 317915 CCT
Lele08g0049 08 316439 317915 Lele08g0049 08 316439 317915 ECH
Lele05g0234 05 1307761 1309135 Lele08g0049 08 316439 317915 hybridization
Lele06g0051 06 341268 342752 Lele08g0049 08 316439 317915 hybridization