Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2209 ATGTTGGCAACAACAATAATAAATATATCTCCCTCCATACGAATAGGATCTTCGAGGGCAATTTCACTGCTTCCCACCTATTTATTTCCCCACTCCTCTCCCTCCGTTCCTCACCCAGGACCTCGTCTCTCACCAAGTCACAGGGACTCTCAACGGAGAAAGATGTCTCAGATCACGGAGGAGATCAGGGCGAAAGCCGAGATGTACTACGGAGATGAAATGTGCCAGGAGAAATCCAAGCAGTTGCTGATGGAAATAAATCTGCCGAATGGGCTTTTGCCATTGAAAGACATGGAGGAATGTGGGATTGTGAGGGAGACAGGGTTCGTGTGGCTGAAGCAGAAGAAGAGCTCGACACACAAGTTCGAAAAGATTGGGAAGCTTGTTGCGTACGAACCCCTGGTGACGGCCTACGTTGAGCCCGGAAGGATCAAGAAGCTGAGGGGCGTGACGACCAAGGAGCTGTTGATTTGGGTGTCGCTGAGCGACATATATGTGGATGATCCGCCCACCGGCAAGATCACATTCAAGACGCCGGCAGGTCTGTTCAGGTCATTCCCAGTTTCGGCTTTCGTGATAGAGGGATACGAACCCAGTGCCGAGACTGACACGAAGGAAGAGAAGCCGGCGGTGAAAGATGCCGTGGAAGTCCAAGAGGTCTGA 663 0.5143 MLATTIINISPSIRIGSSRAISLLPTYLFPHSSPSVPHPGPRLSPSHRDSQRRKMSQITEEIRAKAEMYYGDEMCQEKSKQLLMEINLPNGLLPLKDMEECGIVRETGFVWLKQKKSSTHKFEKIGKLVAYEPLVTAYVEPGRIKKLRGVTTKELLIWVSLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFVIEGYEPSAETDTKEEKPAVKDAVEVQEV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2209 220 MobiDBLite consensus disorder prediction 33 54 - -
Lele13g2209 220 PANTHER T31J12.3 PROTEIN-RELATED 66 192 IPR007493 -
Lele13g2209 220 MobiDBLite consensus disorder prediction 199 220 - -
Lele13g2209 220 Gene3D - 58 199 IPR036758 -
Lele13g2209 220 SUPERFAMILY At5g01610-like 55 194 IPR036758 -
Lele13g2209 220 Pfam Protein of unknown function, DUF538 81 191 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2209 Lele-ChrLele13 28494771 28495973 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2209 13 28494771 28495973 Lele05g0234 05 1307761 1309135 CCT
Lele13g2209 13 28494771 28495973 Lele06g0051 06 341268 342752 CCT
Lele13g2209 13 28494771 28495973 Lele07g0244 07 1339266 1339844 CCT
Lele13g2209 13 28494771 28495973 Lele08g0049 08 316439 317915 CCT
Lele13g2209 13 28494771 28495973 Lele15g0202 15 1179754 1181496 hybridization
Lele13g2209 13 28494771 28495973 Lele16g0211 16 1185313 1187534 hybridization