Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0244 ATGCGAACACGCGAGACCTCCCTTCCTGTAGAGGAGATTACAAAGGAATCGGCAAAGAAGGGTTATGATGTGATGACATCGGACGATGCTGGCAGGTTCGTGTGCAATTACGTGTACTATCACTCGCTTCGTTTCGCAGAGCAAAATGGGATAAAATCCCTGTTTGTGCATGTGCCTCTGTTCTTGATAATAGATGAGGAGACCCAAATGCAATTCATTGCTTCCTTGTTGGAGCACTCAGGCATTTGCTTTGGTTTCGGCAAATTGTCCAAGACAAAGTTGACATCTTCCATGCGTTACGTTCTGTAA 309 0.4531 MRTRETSLPVEEITKESAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFLIIDEETQMQFIASLLEHSGICFGFGKLSKTKLTSSMRYVL 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0244 102 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 4 78 IPR036440 -
Lele07g0244 102 Gene3D - 2 82 IPR036440 -
Lele07g0244 102 Pfam Pyroglutamyl peptidase 6 61 IPR016125 -
Lele07g0244 102 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 4 78 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0244 Lele-ChrLele07 1339266 1339844 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2209 13 28494771 28495973 Lele07g0244 07 1339266 1339844 CCT
Lele15g0202 15 1179754 1181496 Lele07g0244 07 1339266 1339844 CCT
Lele16g0211 16 1185313 1187534 Lele07g0244 07 1339266 1339844 CCT
Lele07g0244 07 1339266 1339844 Lele07g0244 07 1339266 1339844 ECH
Lele05g0234 05 1307761 1309135 Lele07g0244 07 1339266 1339844 hybridization
Lele06g0051 06 341268 342752 Lele07g0244 07 1339266 1339844 hybridization