Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2201 ATGGGGTCCGAATGCCCTCCACCTCCAGCACCAGTAACAATTCATATAACAGGTTTTAAAAGATTCCATGGAGTTTCAGAGAATCCAACAGAGACCATTGTCAATAATTTGACAGAATATATGAAGAAGAAGGGTTTGCCCAAAGGTTTAAATATTGGGAGCTGCAACATTCTTGAAACTGCTGGTCAAGGAGCACTTGTTGCCTTGTACCAGACCTTGCAATCTGCCATTAGTGCCAAGAACTCTGAATCTTCAAATTCCAAAAGAGTCATTTGGCTGCATCTAGGGGTTAACAGTGGTGCGACAAGGTTTGCTGTAGAGCACCAAGCTGTCAATGAGGCTACTTTCCGTTGCCCGGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCATCAGATGGTGGAATTTCACGAGCACGCCAGACTTGCCTTCCAGTAGAGGAGATTACCAAGGAATTGGCAAAGAAAGGTTACGATGTCATGACATCTGATGACGCTGGTAGATTTGTGTGCAATTATGTTTACTACCATTCCCTGCGCTTTGCCGAACAGAATGGCATCAAATCCCTCTTTGTGCACGCCCCTCTCTTCTTGACAATAGATGAAGACACTCAAATGCAATTCATTTCTTCCTTGTTAGAGGTACTTGTCTCTGTATGTTAG 669 0.4425 MGSECPPPPAPVTIHITGFKRFHGVSENPTETIVNNLTEYMKKKGLPKGLNIGSCNILETAGQGALVALYQTLQSAISAKNSESSNSKRVIWLHLGVNSGATRFAVEHQAVNEATFRCPDEMGWKPQKVPIVPSDGGISRARQTCLPVEEITKELAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHAPLFLTIDEDTQMQFISSLLEVLVSVC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2201 222 PIRSF Pyrrolidone-crbxlat_pptds 11 222 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele13g2201 222 Pfam Pyroglutamyl peptidase 14 198 IPR016125 -
Lele13g2201 222 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 13 220 IPR036440 -
Lele13g2201 222 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 12 220 IPR016125 -
Lele13g2201 222 CDD Peptidase_C15 12 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele13g2201 222 FunFam Pyrrolidone-carboxylate peptidase isoform A 11 221 - -
Lele13g2201 222 Gene3D - 12 222 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2201 Lele-ChrLele13 28451886 28453261 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0234 05 1307761 1309135 Lele13g2201 13 28451886 28453261 CCT
Lele13g2201 13 28451886 28453261 Lele15g0212 15 1217946 1219326 hybridization
Lele13g2201 13 28451886 28453261 Lele16g0221 16 1229845 1231200 hybridization