Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0211 ATGTTGGCAACAACAGCAACAAACATGTTCCATGATACGGCTTTGGATGTGATCAGACCGCAATTGCTTCAAAATTTGAATACCCCATGCTCATGTTGGCAAGTAAATGGTGCCGTTGAATACAACAGAGAAGTCGAAGCAGTTGCTGAAGGAAATAAATCTGCCGAATGGACTTTTGCCATGGAGGAATGCGGGATAGTGAGGGAGACTGGGTTCGTGTGGCTGAATCAGAAGAAGAGCTCGACACAAAAGTTCGAGAAGATTGGGAAGCTTGTTTCGTACGGGCCTCTGGTGACCGCCTACGTTGAGCCCGGAAAGATCAAGAAGCTGAGGGGCGTGACGACCAAGGGGCTGTTGATTTGGGTGTCGCTGAGCGACATATATGTGGACGATCCGCCCACCGGCAAGATCACATTCAAGACACCTGCAGGGCTATTCCGATCATTACCAGTTTCGGCTTTGGTCATAGATGGATACGAACCCAGTGCTGAGACAGAGAAGCCGGTTAAAGAGGTGGATGCCACCGTGGAAGTCAAAGAGGTCTGA 546 0.4963 MLATTATNMFHDTALDVIRPQLLQNLNTPCSCWQVNGAVEYNREVEAVAEGNKSAEWTFAMEECGIVRETGFVWLNQKKSSTQKFEKIGKLVSYGPLVTAYVEPGKIKKLRGVTTKGLLIWVSLSDIYVDDPPTGKITFKTPAGLFRSLPVSALVIDGYEPSAETEKPVKEVDATVEVKEV 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0211 181 Pfam Protein of unknown function, DUF538 61 153 IPR007493 -
Lele16g0211 181 PANTHER T31J12.3 PROTEIN-RELATED 61 153 IPR007493 -
Lele16g0211 181 SUPERFAMILY At5g01610-like 61 154 IPR036758 -
Lele16g0211 181 Gene3D - 59 160 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0211 Lele-ChrLele16 1185313 1187534 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0211 16 1185313 1187534 Lele05g0234 05 1307761 1309135 CCT
Lele16g0211 16 1185313 1187534 Lele06g0051 06 341268 342752 CCT
Lele16g0211 16 1185313 1187534 Lele07g0244 07 1339266 1339844 CCT
Lele16g0211 16 1185313 1187534 Lele08g0049 08 316439 317915 CCT
Lele13g2209 13 28494771 28495973 Lele16g0211 16 1185313 1187534 hybridization