Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0238 ATGAATGGAGAGGTAAGTGCGTTAGGAAAAACAGAGAACAAAACTGAACACAATCAACTCATCGTCATGTCTAAACAAGCATACACTGTCTGCTTCTGCTTCAGCCGCCGCTTCAAACACGCCTTAGCGGAGGCGCCACCGGAGATCAAGACCTTTTTCCAGAATTACTCTGAAAATGAGCTAATGACACCTTCTCAACTTCAAAGGTTCCTCGTTGAGGTCCAAAAACAGGACAAAGCCACCATAGAAGATGCTCAAGCCATCATCGATTCCCTCAAGCATTTCCATCGCAAGGGACTTAACGATCAAAGTTTCTTTAAGTATCTCCTCAGTGACACTAACAATCCACTCCCACCTTCTCTTGGGGTGCACAATGATATGACTTTACCCTTGTCGCATTATTTCATATATACAGGCCATAATTCCTATCTAACTGGAAATCAGCTTAGTAGCGCTTGCAGTGATGTCCCCATTATACATGCTCTGAAGAGGGGTGTAAGGGTTATTGAATTGGACATATGGCCTAATGCATCAAAGGACAACGTCGATGTTCTTCATGGAAGGACATTGACTACTCCTGTGGAGCTTATAAAATGTTTGAGGGCTATTAAGGAACATGCATTTGATACATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACTCCAGATCTTCAGGCTAAAGTGGCTGAGATGGTTTCTCAAACATTTGGAGACACACTATTTTATCCAACTATAGAAAGCTTAAAGCAATTCCCTTCTCCTGAATCACTTAAGAAGAGGATTATTATATCAACCAAACCACCAAAGGAGTACCTTGAGGCAAAAGAAATAAAGGAAAAAGGGGAGGATTCACAGCATGGAATGGCTTCAGTGGATGAAGAAGCTTCGGGAAAGGAAGTCTCAACCATGAAACGTGGTACTATACCTGATGTCAAGGATAACATTGTGGATGAAGAAGATCTTAATGATGATGAGGAAGATAGTGATGAATCAGATACTAAGTCACAACATAATGAAGCACCAGAATATAGACGTCTAATTACAATTCATGCTGGAAAGCCTAAAGGTGGGTTACGTGAAAGCCTGAAAGTGGATCCAGATAAAGTGAGGCGTGTAAGTTTAAGTGAGGGACAGCTTGAGAAGGCTGTTATAACTCTTGGGAAAGAATTTGTCAGGTTTACTCAGGGGAATATAGTGAGGGTGTATCCAAAAGGTACTCGCATTACATCTTCAAATTATAACCCATTACTTGGGTGGATGCATGGAGCTCAAATGGTTGCACTTAACATGCAGGGTTATGGCAGATCACTTTGGTTGATGCAGGGAATGTTCAATGCCAATGGAGGGTGTGGTTATGTTAAGAAACCTGATTTTCTATTAAAGACTGGTGCAAATAATGAGGTCTTCGATCCTAAAGCTAAGTTATCTGTGAAGACTACTTTGAAGGTAACTGTATATATGGGGGAAGGATGGTACTATGATTTCAAGTCCACATACTTCGATCAATACTCACCTCCAGACTTCTACACTAGAGTCGGTATAGCTGGAGTCCCAGATGATACTGTAATGAGAAAAACTAAGGTGATAGAGGATAATTGGTTGCCTAATTGGAATGAGGTGTTCGAGTTCACACTTACAGTTCCAGAATTGGCTCTGCTTGTCATAGAAGTTCTTGAGTATGACATGTCTGATAAGGATGATTTTGGTGGACAAACAGTCCTACCTGTATGGGAGCTAAGAAGTGGAATTCGAGCTGTTCCACTGTATAGCTACAAGGGAGAAAAATACAACTCTGTAAAGCTTCTTATGCGCTTCGAATTTAATTGA 1836 0.4107 MNGEVSALGKTENKTEHNQLIVMSKQAYTVCFCFSRRFKHALAEAPPEIKTFFQNYSENELMTPSQLQRFLVEVQKQDKATIEDAQAIIDSLKHFHRKGLNDQSFFKYLLSDTNNPLPPSLGVHNDMTLPLSHYFIYTGHNSYLTGNQLSSACSDVPIIHALKRGVRVIELDIWPNASKDNVDVLHGRTLTTPVELIKCLRAIKEHAFDTSEYPVVITLEDHLTPDLQAKVAEMVSQTFGDTLFYPTIESLKQFPSPESLKKRIIISTKPPKEYLEAKEIKEKGEDSQHGMASVDEEASGKEVSTMKRGTIPDVKDNIVDEEDLNDDEEDSDESDTKSQHNEAPEYRRLITIHAGKPKGGLRESLKVDPDKVRRVSLSEGQLEKAVITLGKEFVRFTQGNIVRVYPKGTRITSSNYNPLLGWMHGAQMVALNMQGYGRSLWLMQGMFNANGGCGYVKKPDFLLKTGANNEVFDPKAKLSVKTTLKVTVYMGEGWYYDFKSTYFDQYSPPDFYTRVGIAGVPDDTVMRKTKVIEDNWLPNWNEVFEFTLTVPELALLVIEVLEYDMSDKDDFGGQTVLPVWELRSGIRAVPLYSYKGEKYNSVKLLMRFEFN 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0238 611 Gene3D C2 domain 477 611 IPR035892 -
Lal6g0238 611 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 24 610 IPR001192 GO:0035556
Lal6g0238 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 376 462 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal6g0238 611 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 125 269 - -
Lal6g0238 611 SUPERFAMILY PLC-like phosphodiesterases 125 464 IPR017946 GO:0006629|GO:0008081
Lal6g0238 611 MobiDBLite consensus disorder prediction 319 333 - -
Lal6g0238 611 Pfam Phosphoinositide-specific phospholipase C, efhand-like 47 112 IPR015359 -
Lal6g0238 611 MobiDBLite consensus disorder prediction 279 303 - -
Lal6g0238 611 PRINTS Phospholipase C signature 130 148 IPR001192 GO:0035556
Lal6g0238 611 PRINTS Phospholipase C signature 156 176 IPR001192 GO:0035556
Lal6g0238 611 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Lal6g0238 611 PRINTS Phospholipase C signature 401 422 IPR001192 GO:0035556
Lal6g0238 611 PRINTS Phospholipase C signature 422 440 IPR001192 GO:0035556
Lal6g0238 611 PRINTS Phospholipase C signature 577 587 IPR001192 GO:0035556
Lal6g0238 611 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 483 610 IPR035892 -
Lal6g0238 611 ProSiteProfiles C2 domain profile. 464 593 IPR000008 -
Lal6g0238 611 SMART plcy_3 346 463 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal6g0238 611 SMART C2_3c 483 591 IPR000008 -
Lal6g0238 611 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 24 610 - -
Lal6g0238 611 SMART plcx_3 125 269 IPR000909 -
Lal6g0238 611 SUPERFAMILY EF-hand 35 120 IPR011992 -
Lal6g0238 611 CDD C2_PLC_like 481 610 - -
Lal6g0238 611 Gene3D - 42 120 - -
Lal6g0238 611 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 476 IPR017946 GO:0006629|GO:0008081
Lal6g0238 611 MobiDBLite consensus disorder prediction 279 346 - -
Lal6g0238 611 Pfam C2 domain 484 585 IPR000008 -
Lal6g0238 611 Pfam Phosphatidylinositol-specific phospholipase C, X domain 127 269 IPR000909 -
Lal6g0238 611 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 375 461 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0238 Lal-Chr6 1567257 1570735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0238 23 610 Acyl Lipid Metabolism Gene Families AT3G55940 66.778 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0238 K05857 - gmx:100037460 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0238 6 1567257 1570735 Lal18g1371 18 16052088 16055736 ECH
Lal22g0359 22 2312828 2317264 Lal6g0238 6 1567257 1570735 ECH
Lal6g0238 6 1567257 1570735 Lal6g0238 6 1567257 1570735 ECH
Lal22g0223 22 1374910 1381715 Lal6g0238 6 1567257 1570735 LSH
Lal4g1578 4 19963344 19969113 Lal6g0238 6 1567257 1570735 PCT
Lal17g1572 17 17133247 17138214 Lal6g0238 6 1567257 1570735 PCT
Lal6g0238 6 1567257 1570735 Lal4g1578 4 19963344 19969113 PCT
Lal6g0238 6 1567257 1570735 Lal17g1572 17 17133247 17138214 PCT