Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0359 ATGGCCAACTACCGTATCTGCGTCTGCTTCCAACGGAGGTTCAAGGTGGGAGAGGCGGTTCCACCGGCGGAGGTAAGGGACTTGTTCAACAAATACTCAGAAGGTGGGTCCCACATGAATGGGAATCAGTTAGGGAGGTTCATGTGTGAAGTTCAAGGAGAGAATGTAGAGGGTGAGGAAGTGGTTGAAGAAGTGATTCAGAAACGACATCATATTAGTCGTTTCGCGAGACACAATCTTAGCCTCGATGATTTCAATCATTACCTCTTCTCCTCTCACCTCAATCCACCTATCACATCTCAGGCAATTACGATATGGTTGATGGATGAAATAAATGTTAATCAGGATATGACGGCTCCATTATCCCATTATTTCATTTATACTGGCCATAACTCCTATCTCACTGGCAATCAACTCAGCAGTGATTGTAGTGATGTCCCCATTATAAAGGCATTGAATAGAGGCGTGAGAGTAGTAGAACTTGATATATGGCCCAATTCTAATAAAGATGATGTGCATGTTTTACATGGAAGGACACTAACAACTCCTGTGGAGCTCATTAAATGTTTGAAATCCATTAAAGAGCATGCTTTTACTGCATCTCCTTACCCAGTCATAATAACTCTGGAAGACCATCTCACACCAGATCTTCAAGCTAAAGTTGCTGAGATGCTTACAGAAACATTCGGAGATATGCTGTTTTGTCCGAATGCTGACAATTTAAGAGAGTTTCCTTCACCTGAAGAATTAAAATATAGGATCTTGATTTCAACAAAACCCCCAAAAGAGTACCTAGAAGCTAAAAGTATCAACATGAATTCCAAAAAATTGCTGAAATCAAAGGATTTTGATGAAGATGATTCGGGAAAAGAAGCCACTGATGTGGCAAAAAACCAAAATGGAGATGATAGGGGTGATTCTGACACAAATCAACATAGTGATGATGAGTTTTACGATTATTGTTCTCCTGAGTTGTGTCCATCTGCAGCTTCTAGTTATAAGCGTCTAATTGCTATTCATGCTGGAAAACCCAAGGGAAGCCTGAAGGAAGCATTAAAAGTTGAAGATGACAAAGTTAGACGCCTTAGCTTAAGTGAACAATCCCTTGAAAAGGCTGCTGAGTCATTTGGAACTCATCTTATTAGATTCACTCAGAAGAACTTTTTGAGGGTGTACCCCAAGGGTACACGGTTCAATTCCTCCAACTACAAGCCACTGAATGGCTGGATGCATGGTGCTCAAATGGTTGCATTCAATATGCAGGGATATGGCAAACATCTTTGGATCATGCATGGAATGTTTAGATCCAATGGGGGATGTGGTTATGTCAAAAAGCCAGACTTTCTTATGAATGTGGGTCCAAATAATGAGGTATTCAATCCTAAAGATCGGTTGTCAGTGAAGAAGACACTAAAGGTGAAAGTTTATCTGGGAGATGGATGGCGCATGGATTTCAAACAAACTCACTTTGATCTGTATTCTCCGCCTGATTTTTATGTCAGGATTGGTATAGCTGGAGTGCCAGCTGATGAGATAATGAAGAAAACAAAGATACTAGAGGATAATTGGATACCTTATTGGGAAGAAGAGTTCACCTTCCCTTTAACTGTCCCTGAACTTGCTTTACTTAGAGTGGAAGTGAATGAATATGACATGTCTGAGTCAGATGATTTTGCAGGTCAAACTTGTTTACCAGTTTCTGAATTGAAGCAAGGCGTTCGTGCAGTTCCCCTCCATAACCGTAAGGGAGAGAAGTACAACTCAGTTAGGCTTCTCATGCGATTTGAGTTCATTTAA 1797 0.4079 MANYRICVCFQRRFKVGEAVPPAEVRDLFNKYSEGGSHMNGNQLGRFMCEVQGENVEGEEVVEEVIQKRHHISRFARHNLSLDDFNHYLFSSHLNPPITSQAITIWLMDEINVNQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALNRGVRVVELDIWPNSNKDDVHVLHGRTLTTPVELIKCLKSIKEHAFTASPYPVIITLEDHLTPDLQAKVAEMLTETFGDMLFCPNADNLREFPSPEELKYRILISTKPPKEYLEAKSINMNSKKLLKSKDFDEDDSGKEATDVAKNQNGDDRGDSDTNQHSDDEFYDYCSPELCPSAASSYKRLIAIHAGKPKGSLKEALKVEDDKVRRLSLSEQSLEKAAESFGTHLIRFTQKNFLRVYPKGTRFNSSNYKPLNGWMHGAQMVAFNMQGYGKHLWIMHGMFRSNGGCGYVKKPDFLMNVGPNNEVFNPKDRLSVKKTLKVKVYLGDGWRMDFKQTHFDLYSPPDFYVRIGIAGVPADEIMKKTKILEDNWIPYWEEEFTFPLTVPELALLRVEVNEYDMSESDDFAGQTCLPVSELKQGVRAVPLHNRKGEKYNSVRLLMRFEFI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0359 598 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0359 598 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 598 - -
Lal22g0359 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0359 598 Gene3D - 20 96 - -
Lal22g0359 598 Pfam Phosphatidylinositol-specific phospholipase C, X domain 117 259 IPR000909 -
Lal22g0359 598 CDD PI-PLCc_plant 115 437 - -
Lal22g0359 598 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 462 IPR017946 GO:0006629|GO:0008081
Lal22g0359 598 MobiDBLite consensus disorder prediction 281 314 - -
Lal22g0359 598 Gene3D C2 domain 465 598 IPR035892 -
Lal22g0359 598 ProSiteProfiles C2 domain profile. 444 580 IPR000008 -
Lal22g0359 598 PRINTS Phospholipase C signature 120 138 IPR001192 GO:0035556
Lal22g0359 598 PRINTS Phospholipase C signature 146 166 IPR001192 GO:0035556
Lal22g0359 598 PRINTS Phospholipase C signature 243 260 IPR001192 GO:0035556
Lal22g0359 598 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Lal22g0359 598 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Lal22g0359 598 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Lal22g0359 598 SUPERFAMILY EF-hand 10 96 IPR011992 -
Lal22g0359 598 CDD C2_PLC_like 468 597 - -
Lal22g0359 598 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 597 IPR035892 -
Lal22g0359 598 SMART C2_3c 470 578 IPR000008 -
Lal22g0359 598 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 598 IPR001192 GO:0035556
Lal22g0359 598 Pfam Phosphoinositide-specific phospholipase C, efhand-like 24 92 IPR015359 -
Lal22g0359 598 Pfam C2 domain 471 573 IPR000008 -
Lal22g0359 598 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal22g0359 598 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 115 259 - -
Lal22g0359 598 SMART plcx_3 115 259 IPR000909 -
Lal22g0359 598 SUPERFAMILY PLC-like phosphodiesterases 115 451 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0359 Lal-Chr22 2312828 2317264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0359 1 598 Acyl Lipid Metabolism Gene Families AT5G58700 63.245 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal22g0359 K05857 - cit:102623592 879.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0359 22 2312828 2317264 Lal22g0359 22 2312828 2317264 ECH
Lal22g0359 22 2312828 2317264 Lal6g0238 6 1567257 1570735 ECH
Lal22g0359 22 2312828 2317264 Lal18g1371 18 16052088 16055736 ECH
Lal22g0359 22 2312828 2317264 Lal22g0224 22 1382403 1386172 ECH
Lal22g0359 22 2312828 2317264 Lal17g1572 17 17133247 17138214 ECH