Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1371 ATGGGCACCTTCACATACAACTACAAAATGTTCAAATGCTTCAACAGAAAATATGCTATCACCGATCAATCTCCACCACCGGATGTTAAGGATGTTTTTTCCACCTTCTCCGGCGGTGATATCTCTATCTCTGCTGAAAAACTACGGTGGTTCCTTGTGGACCACCAAGGTGAAATGGAATGTACCACACAGGATTCTGAATGTATCATTGATAATGTTCTTCGATCTTTGAAACGGAATCAGGAAAAGGAAACTGACTCTGCTGTTATGTTTGAATCCGATAATGGGGTCCACCAAGGACTCACTCTTGATGATTTCTTTCATTTCTTGTTTCTTGATGATTTCAATGGCCCCCTTAAATCACAGGTACATCATGACATGAATGCTCCATTATCACATTATTTCATATATACAGGGCACAATTCCTATCTCACTGGGAATCAGCTGAGCAGTGATTGCAGTGATGTGCCCATCATAAAGGCTCTGCAACGTGGCGTGCGAGTTATCGAACTTGATTTATGGCCTAATTCAACCAGAGATGATATCGATGTAGTTCATGGAAGGACACTTACCACTCCTGTCTCACTCGCCCAATGTTTGAAGTCTATAAAAGAGTATGCTTTTGTTAAATCTGAATACCCAGTGATCATAACCTTAGAAGATCACCTTACACCAGATCTTCAGGCTAAAGTTGCTGAGATGACAACTCAAATATTTGGAGAAATGCTATATTATCCTCACACAGATACTATGGTGGAATTCCCTACACCAGAGTCATTAAAATCTCGAATTCTTATATCGACCAAACAACCAAAAGAATATCTTGAATGCAAGCAATTTAAGGACAAGGAGATTGAAAGGGAATTGGCTGAAGAAGGATCATCATCTCCAGGCCATTCTACTGATGTTGAATCCGAAGAAAAGTGCAATGGAAGTGATCTCGATGATCAAGAAGATTTGATTGCACTTGACAAAAAAACAGACCAGCAAGGTAGTACACCTGAGTACAAACGTTTGATTACAATCCATGCTGGGAAACCAAAGGGTCATATAAAGGATAGCTTAAAAGCTGTTGGGAGTGTTAAACGCTTGAGCTTGAGCGAGCAAGAACTCGAAAGGGCTTCTGTCTCTCATGGACCAGATCTTGTTAGGTTTACACAGAAGAATATTCTCCGGGTGTATCCAAAGGGAACACGCGTCAACTCGTCAAATTACAGGCCACATATAGGGTGGATGTATGGAGCTCAGATGGTTGCATTAAACATGCAGGGGCATGGGAGATCACTCTGGTTCATGGAAGGGATGTTTAGATCAAATGGAGGGTGTGGTTATGTGAAAAAGCCTAAGTTTCTATTGGAAAGAGATCCAGAAAATGAGACCTTTGATCCTAAAAGAACATTGCCAGTGAAGAAGACATTAAAGGTAAAAGTATATATGGGAAATGGGTGGAGCTCAGATTTCAGCAAAACACATTTTGATGCATTCTCTCCACCAGACTTTTACACAAAGGTTTGTATTGTTGGAGTTCCAGCTGATAGAGCGAATAAGAAAACAAAGATAATTGCAGATAACTGGTTTCCTGTATGGGATGAAGAGTTTGAATTTGCATTGAGTGTTCCAGAGCTAGCTTTGCTCAGAATAGAAGTTCGAGAATATGATAAACATGAAAAAGATGACTTTGGTGGCCAAACATGTTTACCAATCTCTGAACTTAGACCTGGCTTTCGTTCAGTCCCTCTTTATGATCAAAAGGGTGAGAAATTAAAATCTGTAAAGCTTCTAATGCGGTTTCAGTTTAGATGA 1803 0.4016 MGTFTYNYKMFKCFNRKYAITDQSPPPDVKDVFSTFSGGDISISAEKLRWFLVDHQGEMECTTQDSECIIDNVLRSLKRNQEKETDSAVMFESDNGVHQGLTLDDFFHFLFLDDFNGPLKSQVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDVPIIKALQRGVRVIELDLWPNSTRDDIDVVHGRTLTTPVSLAQCLKSIKEYAFVKSEYPVIITLEDHLTPDLQAKVAEMTTQIFGEMLYYPHTDTMVEFPTPESLKSRILISTKQPKEYLECKQFKDKEIERELAEEGSSSPGHSTDVESEEKCNGSDLDDQEDLIALDKKTDQQGSTPEYKRLITIHAGKPKGHIKDSLKAVGSVKRLSLSEQELERASVSHGPDLVRFTQKNILRVYPKGTRVNSSNYRPHIGWMYGAQMVALNMQGHGRSLWFMEGMFRSNGGCGYVKKPKFLLERDPENETFDPKRTLPVKKTLKVKVYMGNGWSSDFSKTHFDAFSPPDFYTKVCIVGVPADRANKKTKIIADNWFPVWDEEFEFALSVPELALLRIEVREYDKHEKDDFGGQTCLPISELRPGFRSVPLYDQKGEKLKSVKLLMRFQFR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1371 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 365 451 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal18g1371 600 Pfam Phosphatidylinositol-specific phospholipase C, X domain 127 269 IPR000909 -
Lal18g1371 600 PRINTS Phospholipase C signature 130 148 IPR001192 GO:0035556
Lal18g1371 600 PRINTS Phospholipase C signature 156 176 IPR001192 GO:0035556
Lal18g1371 600 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Lal18g1371 600 PRINTS Phospholipase C signature 390 411 IPR001192 GO:0035556
Lal18g1371 600 PRINTS Phospholipase C signature 411 429 IPR001192 GO:0035556
Lal18g1371 600 PRINTS Phospholipase C signature 566 576 IPR001192 GO:0035556
Lal18g1371 600 MobiDBLite consensus disorder prediction 287 313 - -
Lal18g1371 600 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal18g1371 600 SMART plcy_3 336 452 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lal18g1371 600 Gene3D - 24 117 - -
Lal18g1371 600 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 599 IPR001192 GO:0035556
Lal18g1371 600 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 465 IPR017946 GO:0006629|GO:0008081
Lal18g1371 600 CDD PI-PLCc_plant 124 439 - -
Lal18g1371 600 SMART C2_3c 472 580 IPR000008 -
Lal18g1371 600 SMART plcx_3 125 269 IPR000909 -
Lal18g1371 600 CDD C2_PLC_like 470 600 - -
Lal18g1371 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 125 269 - -
Lal18g1371 600 ProSiteProfiles C2 domain profile. 453 582 IPR000008 -
Lal18g1371 600 Pfam C2 domain 472 573 IPR000008 -
Lal18g1371 600 SUPERFAMILY PLC-like phosphodiesterases 125 453 IPR017946 GO:0006629|GO:0008081
Lal18g1371 600 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 599 - -
Lal18g1371 600 Gene3D C2 domain 467 600 IPR035892 -
Lal18g1371 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 472 599 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1371 Lal-Chr18 16052088 16055736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1371 5 599 Acyl Lipid Metabolism Gene Families AT2G40116 60.582 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1371 K05857 - gmx:100777010 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0238 6 1567257 1570735 Lal18g1371 18 16052088 16055736 ECH
Lal22g0359 22 2312828 2317264 Lal18g1371 18 16052088 16055736 ECH
Lal18g1371 18 16052088 16055736 Lal18g1371 18 16052088 16055736 ECH
Lal18g1371 18 16052088 16055736 Lal22g0224 22 1382403 1386172 LSH
Lal18g1371 18 16052088 16055736 Lal18g1371 18 16052088 16055736 PCT
Lal18g1371 18 16052088 16055736 Lal22g0224 22 1382403 1386172 PCT
Lal22g0224 22 1382403 1386172 Lal18g1371 18 16052088 16055736 PCT