Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0151 ATGTCTGGAATAGTAGTTGTTTTTGATTTTGACAAGACCATTATTGATTGTGATAGTGATAATTGGGTCATTGATGAATTGGGTTTCACAGATTTGTTCAATGATCTTCTTCCCACTATGCCTTGGAACTCTCTTATGGATAGGATGATGTTGGAGCTTCATTCACAAGGTATAACAATTGAAGACATTGAGAATGTTCTGCAAAGGATTCCTATACATCCTAGAATAATACCTGCACTTCAAGCAGTTCATGATTTAGGGTGTGATTTAAGGATTGTAAGTGATGCAAACTTGTTCTTCATTGAGACAATTTTGAAGCACTTAGGAATAAGAGAATATTTTTCAGAGACTAACACCAACCCAGGTTATGTTAATGAAGAAGGAAGGTTAAGAATTTTGCCTTACCATGACCTTACTAAAGCTCCTCATGGTTGCAGCTTGTGTCCTCCAAACATGTGCAAGGGTCTAATCATAGATAGAATCCAAGATTCAATGTCCATTAAGGATGACAAGAGGTTCATCTATCTTGGTGATGGTGCTGGTGATTATTGCCCAAGTTTAAGGCTTAAAGAGAGAGATTTTATGATGCCAAGGAAGAACTTTCCAGTATGGGATTTGATATGTAAAGACCCTTTGCTTGTGAAGGCTGAAATCCATGGCTGGAATGATGGTGAAGAGCAGGAACAAATTTTATTGCAATTGATCAACAAAATTTCTATGGACAAAAACTCTCAATTCATTTCACCTGATTGCAAGCTACAGATTCTATCAATCTCTAATCCTGAGGTTTTGCCTAAAGTTCTATCGGTTCGACCTTAA 819 0.37 MSGIVVVFDFDKTIIDCDSDNWVIDELGFTDLFNDLLPTMPWNSLMDRMMLELHSQGITIEDIENVLQRIPIHPRIIPALQAVHDLGCDLRIVSDANLFFIETILKHLGIREYFSETNTNPGYVNEEGRLRILPYHDLTKAPHGCSLCPPNMCKGLIIDRIQDSMSIKDDKRFIYLGDGAGDYCPSLRLKERDFMMPRKNFPVWDLICKDPLLVKAEIHGWNDGEEQEQILLQLINKISMDKNSQFISPDCKLQILSISNPEVLPKVLSVRP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0151 272 SUPERFAMILY HAD-like 4 188 IPR036412 -
Lal18g0151 272 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lal18g0151 272 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 187 - -
Lal18g0151 272 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 270 IPR016965 GO:0016791
Lal18g0151 272 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lal18g0151 272 PANTHER INORGANIC PYROPHOSPHATASE 1 270 - -
Lal18g0151 272 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Lal18g0151 272 Gene3D - 2 188 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0151 Lal-Chr18 1200399 1202206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0151 K13248 - gmx:100785878 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1109 16 7502123 7503619 Lal18g0151 18 1200399 1202206 ECH
Lal23g0549 23 8368825 8371510 Lal18g0151 18 1200399 1202206 ECH
Lal18g0151 18 1200399 1202206 Lal18g0151 18 1200399 1202206 ECH
Lal20g1107 20 15253117 15255264 Lal18g0151 18 1200399 1202206 LSH
Lal18g0151 18 1200399 1202206 Lal25g0319 25 2182229 2184355 PCT
Lal18g0151 18 1200399 1202206 Lal10g1102 10 17879778 17883893 PCT