Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00355 ATGGTGTTGCAGAAGAGGTTAGACTATAGCTTTTATGGCTATCATGTGCCAACCAAGCGCCGAGCTACTCGATCAGCTAAGAGGAGGGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCATAGCTGACAATTTGTTGCAAGAGAAACAGAATCCAACCATATCCAGTGATAGATCATCGGAAAAGGATAGGGATGGATTTTCTAAAGTGGAATGCCAGGATGCAAATAAACCATTCAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAAATGTCAGCATGAATTTGTTAGAGAAGGATGCCCAGATGCAAATAAACCATTCAAAGCTGAGCTTTCAGATGAAGGAAGTAGTGACAGAAAGTGTTTCTCTAATATTTCTTCACAATTATACAATCAAAATTGCTGTTTGAAGGAACTCCTGCAACATGAAATTGATGGTCATTCATGCATTGCTTCTATAGTAACAAGTTCCAGTTGCTCAGAGAAGATTGTTGCTGAGAGACCGGTGGATGGAAAAGGCCACAACGGAGTGGAAAATTTAGCGAGCAAAGTTGAATTAGGTTCCTCTGGATGTCTAGAGAGTAGTGGTTGCAAGTTAGATGGTGATGTTAGTAAAGTAAAAGATGGTAAGGTTGGGAAGGTTCCAATTGATACTGGGACTGGGATGTGCTGTTTTGAGGATCCCTTGGATGAAAAACCTCCTGCACTGATCAGTTCATGTGGCAATGCCAAGATGTCTGGGTATGATGACATCAAGCCTCAGAGCTCATTGTCCAAAGGTTGTGACAATGTACTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTATGCTCACCCTAGTACCAAAATAAATTCCTTTAAGCAAATTACTTGTATAGATGATAGAAAAATAAAGAAAACATTGGATTCTAAATATCATAAAGTTTCTCAAGAATCCAAGCACGATATACTATCTAACAGTGTTTTGGATGGAAATTTGAAGTCAGTTTACAGCAGTAGGAAGAACTATTATAAAAGCCAAAGATCTCAAATGTGTATTCCTTTCAAAAAGAGGAAGCTTTTTAACTGCAGCAGCTCTGATACAAATTCTAACGGATATATCAGAAGTGATGACACTTGTTATTCACCCAAGAATGACACGAACCAAAGTGTTTCTTGTTCATCTTCTGGTATGAGCAAAGATCATGGAACATCATCCTTGGGACACTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTCAGAGTGCCTGAGCTTTTTATCGAGATTCCAGAAACTGCAACCGTCGGGTCCCTGAAGAGGACAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGTGGATTGCGCGTGGGTGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTTCAGACTGGAATTTCTCATGATAACCACCTGGATGCTTTGGGCTTCGCCTTGGAGCCTAATTGTTCACAAAACCGATCATCTGCATGTGCTACAACAGATTCTCTCTGCGTTCCTGGTGCAGATATGCATCAGCCTTTAATAGGGTATCCTTCAAGTCGTGCTGTAATTCATCAGAGGATTCAGGGCTTTTCTAACATGTTAGCTGAGCATCAAGCAACCAGTTTAGGTAACCTTGTTGAAAGTGATCATGATTCAGCACCTTCTCCAATCAACACATCAGGTGAAAAAAATTTGACAGATTCAAAAGAACTTATTACTGTTCCTGAAATGGGTATGGAGGCACTAGCTGTACTACCTGTGCATCAGAAGTCAAAGCGAACTGAGATCGCACCACGCCGAATTCGTAGGCCCTTTTCTGTTGCTGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTGGGAACTGGAAGGTGGCGTGATGTTAAACTTCATGCTTTTGATAATGCAAAGCATCGGACATACGTCGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCACCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCAGCAGACTAAGCAACAGCTCAAGCACCACTCTACAAAACCTTGCCTTCTCCTTTAA 2163 0.4156 MVLQKRLDYSFYGYHVPTKRRATRSAKRRATFQRRLEDNQMCAFDLLATIADNLLQEKQNPTISSDRSSEKDRDGFSKVECQDANKPFKTELSDEASCDRKCQHEFVREGCPDANKPFKAELSDEGSSDRKCFSNISSQLYNQNCCLKELLQHEIDGHSCIASIVTSSSCSEKIVAERPVDGKGHNGVENLASKVELGSSGCLESSGCKLDGDVSKVKDGKVGKVPIDTGTGMCCFEDPLDEKPPALISSCGNAKMSGYDDIKPQSSLSKGCDNVLVDSRDDDENFSGYAHPSTKINSFKQITCIDDRKIKKTLDSKYHKVSQESKHDILSNSVLDGNLKSVYSSRKNYYKSQRSQMCIPFKKRKLFNCSSSDTNSNGYIRSDDTCYSPKNDTNQSVSCSSSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELFIEIPETATVGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNCSQNRSSACATTDSLCVPGADMHQPLIGYPSSRAVIHQRIQGFSNMLAEHQATSLGNLVESDHDSAPSPINTSGEKNLTDSKELITVPEMGMEALAVLPVHQKSKRTEIAPRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLHAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKHHSTKPCLLL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00355 720 Gene3D - 608 712 - -
Gma15g00355 720 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 719 - -
Gma15g00355 720 ProSiteProfiles Myb-like domain profile. 615 670 IPR001005 -
Gma15g00355 720 MobiDBLite consensus disorder prediction 397 417 - -
Gma15g00355 720 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 615 674 IPR017930 -
Gma15g00355 720 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 719 IPR031105 -
Gma15g00355 720 ProSiteProfiles Ubiquitin domain profile. 425 495 IPR000626 GO:0005515
Gma15g00355 720 SUPERFAMILY Ubiquitin-like 420 511 IPR029071 -
Gma15g00355 720 SUPERFAMILY Homeodomain-like 621 702 IPR009057 -
Gma15g00355 720 MobiDBLite consensus disorder prediction 565 584 - -
Gma15g00355 720 CDD SANT_TRF 621 671 - -
Gma15g00355 720 SMART sant 619 672 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00355 Gma-Chr15 3011029 3015002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00355 - - gmx:100780881 1395.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00355 15 3011029 3015002 Gma15g00355 15 3011029 3015002 ECH
Gma15g00355 15 3011029 3015002 Gma18g00356 18 3057931 3063089 ECH
Gma15g00355 15 3011029 3015002 Gma11g02219 11 37478067 37483327 ECH
Gma18g01670 18 46880140 46883848 Gma15g00355 15 3011029 3015002 ECH
Gma07g01235 07 16106783 16110213 Gma15g00355 15 3011029 3015002 ECH
Gma15g00355 15 3011029 3015002 Gma12g00553 12 4626308 4629990 PCT
Gma15g00355 15 3011029 3015002 Gma11g01255 11 10690299 10695851 PCT
Gma12g00553 12 4626308 4629990 Gma15g00355 15 3011029 3015002 PCT
Gma11g01255 11 10690299 10695851 Gma15g00355 15 3011029 3015002 PCT