Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g02219 ATGGTGTTGAAGAAGAGAGTAGATCATGGATTTGATGGCTTACGAGTTCCTGTTATACCTAAAGCTCCTAGATCTGCAAGAAGGAGGATTGCTTTCAAAAAAGCAGTTGAAGATGGTCAAGTTTGTGCTATTGAACTACTGGCATCTTTAGCTGGTCAGTTGTTGCAGGAGAGTGAAGGTTCTGCTTCCAGCAATGCATCTGAAGGAAATCATCATCCCCCCTTTAGCCAAGGTGTCATTGAGCAAGATATACAAGATGGAGTTAAACCATTAAAGAAGGAGGAAATTCATCAGGGAAGTTGTGTAGAGAGTACTTTTAAGACCGAGGTAGCCTCACAAAACAGTAGTCAGAAACCTCTTTCACATACTAAGACGGGACATGTTTCAGTTAATAATAGTTCTGACTGTTGTGAGAAAGTTGAAGCTGATGTGAAGTCTGAAATTTTCGAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAGAAACACGTGAAAATTTTAGGAAGTCTAGTGATGGTAAAATAAAGAATGGGTTTAAACGGGAACAGGAGGCTGGAAGTTCATGCATTCGAGGATCAAATTTAGCTGATAAGTGTAGTTTGGAGGGCCACTTAGAATTGTATGTATCTCCTGCACTAATTGACTCAAAAAGTAATAAGAAATCTCCATTTCATAGGAAATCTTTTCCCAGTGCTTCCTTTTCCAGGAATGGGAATGGTATTAAGTTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAAGTTTTGCACGAAGCCAAAGGCTTTTAGGTCTCCACGACGCATTGCACACCGAAGAATCAGGAATTTGATGTCTTCCAAATACTGGAAGACAGCTCCAAAGTTGAAGGACTCTGAACTTTCTAGATCTGAATTTGCAGATCTAGGAGTACCTCGTTATCATAAGAGGAAGACTTGTTACGGTTTTGAAAGATCTCAGCACAATGCCATTGTTAAAAAGAGGAAATTCGTTGACCGGGTTTCAGGAGTAACTTCTGATGGAGGATTCAGTAGTGAGAGTGTGTCCAATTCACCACAGAAAGGGATGGATGGAGACAAGCCTAGCTCATCTGCAAAATTGCATGTACCTAAGGCTAAGGATTCTCATGTAAAGTTTAGCATAAAGTCAATAAGGATTCCAGAGCTTTATATTGAGGTTCCTGAAACTTCAACTGTTGGTTCACTAAAGAGGACTATCGTGGAGGCAGTGATGGCTATACTTGGAGGTGGTGCACATGTTGGTGTTCTTCTTCAGGGGAAAAAAGTTAGAGATGACAATAGAACACTTGTGCAGACTGGTATATCTTGCAATGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCACTTCACTACAAGCTTCTCCAACTGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGCCTACCAGGTCCACAGAAATTCCTGTCTTAGATTCAGGAATTACTGATACCTTGCACGACTCACCCTTGCTGACATATCCGGGCAACCTAATTGAAAGTAACCATGAGTCTACTTCTTCACTTGCGGACACTACACTTGACAAACTAACACCTGATTCCAGAGCGATAGTTGTTGTTCCAGCTACCACAGAAACATTAGCTGTGGTTCCTGTGAGTCAGAAAACCAAGCGCTCTGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGACTGAGGTAGAAGCACTTGTTCATGCAGTTGAGGAACTCGGAACTGGGAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTAGTGCACACCGCAACAATCTCCCCTCAACAAAGGAGGGGAGAGCCAGTACCTCAGGAGCTCTTGGACAGGGTTTTGGCTGCTCATGCTTTCTGGTCTCAGCACCAAGCCAAGCAACATGGCAAGCATCAAGCTGGACCAGGAACCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCTTGTGTGTGTTGA 2040 0.4206 MVLKKRVDHGFDGLRVPVIPKAPRSARRRIAFKKAVEDGQVCAIELLASLAGQLLQESEGSASSNASEGNHHPPFSQGVIEQDIQDGVKPLKKEEIHQGSCVESTFKTEVASQNSSQKPLSHTKTGHVSVNNSSDCCEKVEADVKSEIFEWDNKFGNYSNRLVETRENFRKSSDGKIKNGFKREQEAGSSCIRGSNLADKCSLEGHLELYVSPALIDSKSNKKSPFHRKSFPSASFSRNGNGIKLGFRDDDENFLRCKKFCTKPKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDSELSRSEFADLGVPRYHKRKTCYGFERSQHNAIVKKRKFVDRVSGVTSDGGFSSESVSNSPQKGMDGDKPSSSAKLHVPKAKDSHVKFSIKSIRIPELYIEVPETSTVGSLKRTIVEAVMAILGGGAHVGVLLQGKKVRDDNRTLVQTGISCNENLDTLSFMLEPTSLQASPTVCVGDPSSQCETSQPTRSTEIPVLDSGITDTLHDSPLLTYPGNLIESNHESTSSLADTTLDKLTPDSRAIVVVPATTETLAVVPVSQKTKRSEFVQRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGPGTLKITEASAERPCVC 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g02219 679 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 564 622 IPR017930 -
Gma11g02219 679 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 671 - -
Gma11g02219 679 Gene3D - 556 660 - -
Gma11g02219 679 MobiDBLite consensus disorder prediction 343 373 - -
Gma11g02219 679 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 671 IPR031105 -
Gma11g02219 679 MobiDBLite consensus disorder prediction 343 362 - -
Gma11g02219 679 SUPERFAMILY Homeodomain-like 569 650 IPR009057 -
Gma11g02219 679 ProSiteProfiles Myb-like domain profile. 563 618 IPR001005 -
Gma11g02219 679 SMART sant 567 620 IPR001005 -
Gma11g02219 679 MobiDBLite consensus disorder prediction 58 77 - -
Gma11g02219 679 CDD SANT_TRF 569 619 - -
Gma11g02219 679 MobiDBLite consensus disorder prediction 58 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g02219 Gma-Chr11 37478067 37483327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g02219 - - gmx:100814318 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00356 18 3057931 3063089 Gma11g02219 11 37478067 37483327 ECH
Gma18g01670 18 46880140 46883848 Gma11g02219 11 37478067 37483327 ECH
Gma07g01235 07 16106783 16110213 Gma11g02219 11 37478067 37483327 ECH
Gma11g01255 11 10690299 10695851 Gma11g02219 11 37478067 37483327 ECH
Gma12g00553 12 4626308 4629990 Gma11g02219 11 37478067 37483327 ECH
Gma15g00355 15 3011029 3015002 Gma11g02219 11 37478067 37483327 ECH
Gma11g02219 11 37478067 37483327 Gma11g02219 11 37478067 37483327 ECH
Gma18g00356 18 3057931 3063089 Gma11g02219 11 37478067 37483327 GST