Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g01235 ATGGTGTTGCAGAAGAGGCTGAACTATGGTTTTAATGGCTATCAGGTGCCTGTCATTCCTAGAGGGAGGGGCACAATCAAGAAGAAACCCGACAACAATCAGATACAGGCTTTTGAAATGTTGGCTAGTGTAGCGGGCAACTTTTTGCAGAAGAATGAGAGTTCTGATCCTAAAAATGTTGTGTTTGTGGAAGATCCTTGCTCTTTCTGTGGTACTAACATAAAGGACAAATATGAGGATGAAAGGAGGTCATTTATGAGGGACTCGTTTGACCATGGAGCTTGCAGTGAAATTGCCTCTGCCTTTGTCCCAAGTATGCAAGGGAAACATGACAACCATAGAGGCATGGGGGATTCATCTTTTCTTGACAATCATCTTGAAGGCCAAGGACAAAATGTCCTTGAGAGGGAAGATGAAAGGATCAAAAGGAGAAGTGTAAATGGGAAAACCATCCACATTAAAGGTTGCTCCGATGGGTTAATAGAACCATGCCACAAAGTATCCAAACATTGTAGTTTAGCTAATAATGCGGAAAAACCATCGTTGGAGTGTCGCAAGCATCTTGATTCTTTTCCCAATGGTTTTACTTCTAGGAAATTAGTTAATAGAGATGATGATGAAAACTTAGTTAGGTGCACACAACTGAACTCCAAGAATAATAATACATCTGGCGCACCACCTGATATGCCAAAATTGAAGGATGCAAGTCCTATTATGAGTGATGAGAACAACAGTAGGGACATTTTCGAGTTTGAAAATTTACAACGGATGTATCCATTTAAGAAGAGGAAATTCTTCAATCAGAATTCATCTTCTACATCTGATAGGGGGTCTCAATGTCAAGGCATGTTTGATTCTTCTGACACCACCAGGGTTAATGGCACAAACCATGCAATTGAAGAATCGTCCTCTATAGTTGGTCAACAAGCACATTCTGGGTCCAGGGCTTGTAATGTGAAGCTCAGCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATACCGGAAACTGCAACCATTGGTTCATTGAAAAGGACAGTAATGGAGGCTGTGACAACTATACTTGGAGATGAATTACATGTGGGCATCCTTCTTCAGGGAAAGAAAGTTCGAGATGATAGCAAAACTCTAATCCAAACTGGGATATCTCAAGATGACAAACGTCATAGATTGGGATTTATGTTGGAGCCAAGGCATACTCCAATTTCTCCAACTTCATACAATGATGACCCTTGTTTTCTAACCACTAGTTCGCGAAAAAAATTATCCAGGCAATCAACATCTTTAACATTACAACAAGGAACGTATAATGTATCCAAAGAACGTTCTATGATCAAAATTGAAAGTTGTGCTAAGGGTGATCTTAATATGGTCTCCTCTCTAGAAGATACTTCAACTAACAATAACATGTCAAAGTGTCGTGCTCTAGTGGCAGTTCCTGCCATTAACATGGAGGCATTAGCGGTGGTTCCATTCTGGCGCAAATCTGGAAATCCTGACTTTGCACAACGCCGAATCAGGAGGCCATTCTCTGTTCTAGAAGTAGAAGCATTGGTTCAGGCTGTTGAAAAACTTGGAACTGGAAGGTGGCGTGATGTCAAACAACGTGCTTTTGATCACGCAAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAGACACTAGTGCACACTGCTAGAATCTCCCCGCAGCAAAGGAGGGGAGAACCTGTTCCTCAGGAGCTTCTGGATAGGGTCTTAGCTGCTCATGCCTATTGGTCTCAACACCAGTGTAAGCATCAACTTAAACCACTGTGA 1803 0.4143 MVLQKRLNYGFNGYQVPVIPRGRGTIKKKPDNNQIQAFEMLASVAGNFLQKNESSDPKNVVFVEDPCSFCGTNIKDKYEDERRSFMRDSFDHGACSEIASAFVPSMQGKHDNHRGMGDSSFLDNHLEGQGQNVLEREDERIKRRSVNGKTIHIKGCSDGLIEPCHKVSKHCSLANNAEKPSLECRKHLDSFPNGFTSRKLVNRDDDENLVRCTQLNSKNNNTSGAPPDMPKLKDASPIMSDENNSRDIFEFENLQRMYPFKKRKFFNQNSSSTSDRGSQCQGMFDSSDTTRVNGTNHAIEESSSIVGQQAHSGSRACNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHTPISPTSYNDDPCFLTTSSRKKLSRQSTSLTLQQGTYNVSKERSMIKIESCAKGDLNMVSSLEDTSTNNNMSKCRALVAVPAINMEALAVVPFWRKSGNPDFAQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQHQCKHQLKPL 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g01235 600 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 503 562 IPR017930 -
Gma07g01235 600 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 600 IPR031105 -
Gma07g01235 600 SUPERFAMILY Homeodomain-like 509 590 IPR009057 -
Gma07g01235 600 Gene3D - 497 599 - -
Gma07g01235 600 ProSiteProfiles Myb-like domain profile. 503 558 IPR001005 -
Gma07g01235 600 SMART sant 507 560 IPR001005 -
Gma07g01235 600 CDD SANT_TRF 509 559 - -
Gma07g01235 600 SUPERFAMILY Ubiquitin-like 316 405 IPR029071 -
Gma07g01235 600 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g01235 Gma-Chr7 16106783 16110213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g01235 - - gmx:100807254 1201.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01235 07 16106783 16110213 Gma18g00356 18 3057931 3063089 ECH
Gma07g01235 07 16106783 16110213 Gma11g02219 11 37478067 37483327 ECH
Gma07g01235 07 16106783 16110213 Gma07g01235 07 16106783 16110213 ECH
Gma07g01235 07 16106783 16110213 Gma11g01255 11 10690299 10695851 ECH
Gma07g01235 07 16106783 16110213 Gma12g00553 12 4626308 4629990 ECH
Gma07g01235 07 16106783 16110213 Gma15g00355 15 3011029 3015002 ECH