Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g01255 ATGGTATTGCAGAAAAGGTTAGAGTACGGATTTAATGGCTATCAGGCTCCGGCCATGCCGCGAGCTTCCCGATCAACTAGGAGGAGGGCTAAATTTCGAAGAGCAGAAGACAATCAAAAGTGTGCATTTGACTTATTGGCCACCGTAGCTGGTAAACTATTGCAAGAGAGAGAGAATCCAACCATGTCTAGTGATACATCATTAGAAAAGGATCAGTGTGGATTTGTCAAAGAGTGCCAAGATGCAAATAAACCATCCAAATCTGAGATTTCTGATGAAGGAAGTTGTGACAACAGTGGTTTCTCTCGTCTTTCTTCACAAACAAACAAAAAAAATTGCGGTTTGAAAGAATTCACACATCTTGCAATTGATGGTGATGTAGGGATTGCTTCTATAGTGACAAGTTCTAGTTGCTTAGAGAGGTTCATTGCAGAGAAAATGGTGGATAGCAATAGCCATTTCAAAGTGGAAAATGTTACTAGCAAAGTTAATTTAGATTTTTCTGATTATCCAAAGGATAGTGATTTCAAGTTAGATGGCGATACCAGTAAAGGAAAGGATGAGTTGCATAAATTTGAGAAGGTGCCAATTGGTAGTGGGATTGACATGTGTAATTTTGAGGACCCTTTGGATGTAAATCCTCCTGCATTGATCAGTTTAGGTGGCAATGCCAAATTGTCTGGGTATAATGATAGGATTCCCTGTAGCTTGTTGTCCAAAAGTCGTGACAATGTACCAGTAGTTAGTAGAGATGATGATGAAAACTCTTCTGGGTGTACTCACCCTATAAATACTGAAACCAAGTCCTTTAGGCCAAAGACTTGTATAGGTAAAAGAATGGCTTCTAACTTTCAGAAAGTTGCTGAAAAAACAAAGAATTATGCACTTTCTAACAATGATGGAGATTGGAAGCGAACTTACCTCAGCAAGAGGAACTGCAATAAACACCAAAGTTCTCAGATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAATTATCGCTCTGTTGCAAACTCTAATGGATTGATCAGGAGAGGTGGCATTTATTATTCACCTGAGAATTGTATGAATCAGGATGGATGTGATTCACCACCTGGGATGCACAAAGTCCAAATCTTTCATGCAGACCCTGGAATGTCATCTTTGGAAGCATGCCAACATCAGACGTTACGAAGCATAGGTTCTCATGtgaatcttaggatcaagtcatttagagtGCCAGAGCTTTTTATAGAGGTTCCAGAAACTGCAACAATTGGGTCCTTGAAGAGGACAGTGATGGATGCAGTGACTGCTGTGCTTGGAGGTGAATTGCACATTGGTGTTTTTCTCCAGGGAAAACAAGTTAAGGATGACAGTAAAACTCTACTTCAAACTGGAATTTCTCATCATAACGAGTTGGATGCTTTGGGTTTCACCCTGGAGCCTAATTCTTCACAAAGCCTACCGATTGTATGTGCTTCACATTCTCCTCGTCCTAAAGCTGACATAACTGAGCCTGTAATAAGGTATCCCTCCAGTCCAGCTGTAATTCATCAGAGGATTCAAGGCAACTCTGACATGTTACCTGAGCATCAAGTAACCAGTTTAGGTAGACATTTTGAAAGTGACCATGATTCAGCACCTTCTCCTGTCAATGCGTCTGTTGACAAAAATATGAAAGATTCCAAAGAACTGGTTACTGTTCCTGAAATGGATGAGGAACTAGCTATGGTACCTGTACACCAGAAGCCAAAGCGATCTGAGATCGTCCAGCGTCGAATACGCAGGCCTTTTTCTGTAGATGAAGTAGAAGCACTGGTTCAAGCAGTTGAAAAACTAGGAACTGGAAGGTGGCGTGATGTTAAGCTTTGTGCTTTTGATAATGCAAAGCATCGGACATATGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCCCCTCAGCAAAGGAGGGGTGAACCTGTTCCCCAAGAACTTTTGGACAGGGTTCTAGTGGCCCACGCATACTGGTCCCAGCAACAGACTAAGTCACAGCACAAGCACCATCCAGAAACTGAAACTGTCTTCTCCTTTTAA 2073 0.4086 MVLQKRLEYGFNGYQAPAMPRASRSTRRRAKFRRAEDNQKCAFDLLATVAGKLLQERENPTMSSDTSLEKDQCGFVKECQDANKPSKSEISDEGSCDNSGFSRLSSQTNKKNCGLKEFTHLAIDGDVGIASIVTSSSCLERFIAEKMVDSNSHFKVENVTSKVNLDFSDYPKDSDFKLDGDTSKGKDELHKFEKVPIGSGIDMCNFEDPLDVNPPALISLGGNAKLSGYNDRIPCSLLSKSRDNVPVVSRDDDENSSGCTHPINTETKSFRPKTCIGKRMASNFQKVAEKTKNYALSNNDGDWKRTYLSKRNCNKHQSSQMNIPFKKRKLFNYRSVANSNGLIRRGGIYYSPENCMNQDGCDSPPGMHKVQIFHADPGMSSLEACQHQTLRSIGSHVNLRIKSFRVPELFIEVPETATIGSLKRTVMDAVTAVLGGELHIGVFLQGKQVKDDSKTLLQTGISHHNELDALGFTLEPNSSQSLPIVCASHSPRPKADITEPVIRYPSSPAVIHQRIQGNSDMLPEHQVTSLGRHFESDHDSAPSPVNASVDKNMKDSKELVTVPEMDEELAMVPVHQKPKRSEIVQRRIRRPFSVDEVEALVQAVEKLGTGRWRDVKLCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLVAHAYWSQQQTKSQHKHHPETETVFSF 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g01255 690 Gene3D - 578 681 - -
Gma11g01255 690 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 585 643 IPR017930 -
Gma11g01255 690 SUPERFAMILY Homeodomain-like 590 671 IPR009057 -
Gma11g01255 690 CDD SANT_TRF 590 640 - -
Gma11g01255 690 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 685 - -
Gma11g01255 690 ProSiteProfiles Myb-like domain profile. 584 639 IPR001005 -
Gma11g01255 690 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 685 IPR031105 -
Gma11g01255 690 SUPERFAMILY Ubiquitin-like 395 480 IPR029071 -
Gma11g01255 690 SMART sant 588 641 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g01255 Gma-Chr11 10690299 10695851 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g01255 - - gmx:100797436 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g01255 11 10690299 10695851 Gma11g01255 11 10690299 10695851 ECH
Gma11g01255 11 10690299 10695851 Gma18g00356 18 3057931 3063089 ECH
Gma11g01255 11 10690299 10695851 Gma11g02219 11 37478067 37483327 ECH
Gma11g01255 11 10690299 10695851 Gma12g00553 12 4626308 4629990 ECH
Gma18g01670 18 46880140 46883848 Gma11g01255 11 10690299 10695851 ECH
Gma07g01235 07 16106783 16110213 Gma11g01255 11 10690299 10695851 ECH
Gma12g00553 12 4626308 4629990 Gma11g01255 11 10690299 10695851 GST
Gma15g00355 15 3011029 3015002 Gma11g01255 11 10690299 10695851 PCT
Gma11g01255 11 10690299 10695851 Gma15g00355 15 3011029 3015002 PCT