Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01670 ATGGTGTTGCAGAAGAGGTTGAACTATGGTTTTAATGGCTATCAGGTGCCTGTCATTCCTAGAGCTTCAAGGTCAGCTAGGGGGAGGGGCACAATCAGGAAGAAACCTGACAGCAGCCAGATACAGGCTTTTGAAATCTTGGCTAGTGTAGCTGGAAACTTTTTGCAGGAGAATGAGAGTTCCAATCCTGAAAATGTTGTGCTTGCAAAAGATCCTCGCACTTTGTCTGGTACTAACATAAAGGACAAACATGGGGATGAAAGGTCATTTAAGGGGGCCCTGTTTGAGCATGGAGCTTGCAGTGAAATTGCCTCTGTCTTTGTCCCTAGTATGCAAGGGAAACATGACAACCATAGAGTCATGGGGGATTCATCTTTTCTTGACAATCATCTTGAAGGCCAAGGACAAAATGTCCCTGAGAGGGAAGATGAAAGGATCAAAGGGAGAAGTGTAAATGGGAAAACCATCCACATTAAAGGCTGCTCTAATGGGTTAATAGAACCAGGTCACGGAGTATCTAAACATTGTAGTTCTGCTAATAATGTGGAAAAGCCATCGTTGGAGGGCCGCAAGCCTCTTGATTCTTTTCCCAAATGTTTCACTTCTAGGAAATTAGTTAATAGAGATGATGATGAAACATTAGATAGGTGCACACAACTGAACTCCAAGAATAATACATCTGGCGCACCACCAGATACGCCAAAATTGAAGGATGCAAGTCCTTTTATAAGTGATGAGAACAATAGTAGGGACATTTCTGAGCTTGAAAGTTTACAAAGGATGTATCCATTTAAGAAGAGGAAATTCTTCAATCAGACCTCATCTTCTGCATCTGATAGGGGGTCTCAATGTCAAGGCATGTTTGATTCTTCTGACACCATCAGGGTTAATGGCACAAACCATGCAATTGAGGAATCATCCTCTATAGTTGGTCAACAAGCACATTTTGGGTCCAGGGGTTGTAATGTGAAGCTCAGCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATACCTGAAACTGCAACTATTGGTTCACTGAAAAGAACAGTAATGGAGGCTGTGACAGCTATACTTGGAGATGAATTACATGTGGGCATCCTTCTTCAGGGAAAGAAAGTCCGAGATGATAGCAAAACTCTGATCCAAACTGGGATATCTCAAGATGACAAACGTCATAGATTGGGATTTATGTTGGAGCCAAGACATACTCAATCTCCATCTTCATACAATGATGACCCTTGTTATCCAACCACTAGTTCGCGACAAAAATTATCCAGGCAATCAACATCTGTAACGTTACAACAAGGAACATATAATGTATCCAAAGAACGTTCTATGATCAAAATTGAAAGTTATGCTGAGGGTGATCTTAATATGGTCACCTCTCTAGCAGATACTTCAGCTAACAATAACATGTCAAAGTGTCGGGCTCTGGTGGCAGTTCCTGCCATTAACATGGAAACATTAGCTGTGGTTCCATTCCGGCGCAAATCTGAGAATCCTGACTTTGCACAGCGCCGAATCAGAAGGCCATTCTCTGTTCTAGAAGTAGAAGCATTGGTTCAGGCTGTTGAAAAACTTGGAACTGGAAGGTGGCGTGATGTCAAACAACGTGCTTTTGACCATGCAAAGCATCGAACTTATGTGGATTTGAAGGATAAGTGGAAAACATTAGTGCACACTGCAAGAATCTCCCCTCAGCAAAGGAGGGGAGAACCTGTTCCTCAGGAGCTTCTGGATAGGGTCTTAGCTGCTCATGCCTATTGGTCTCAACAACAGTGTAAGCATCAACTTAAACCACTGTGA 1812 0.4233 MVLQKRLNYGFNGYQVPVIPRASRSARGRGTIRKKPDSSQIQAFEILASVAGNFLQENESSNPENVVLAKDPRTLSGTNIKDKHGDERSFKGALFEHGACSEIASVFVPSMQGKHDNHRVMGDSSFLDNHLEGQGQNVPEREDERIKGRSVNGKTIHIKGCSNGLIEPGHGVSKHCSSANNVEKPSLEGRKPLDSFPKCFTSRKLVNRDDDETLDRCTQLNSKNNTSGAPPDTPKLKDASPFISDENNSRDISELESLQRMYPFKKRKFFNQTSSSASDRGSQCQGMFDSSDTIRVNGTNHAIEESSSIVGQQAHFGSRGCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHTQSPSSYNDDPCYPTTSSRQKLSRQSTSVTLQQGTYNVSKERSMIKIESYAEGDLNMVTSLADTSANNNMSKCRALVAVPAINMETLAVVPFRRKSENPDFAQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQLKPL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01670 603 CDD SANT_TRF 512 562 - -
Gma18g01670 603 ProSiteProfiles Myb-like domain profile. 506 561 IPR001005 -
Gma18g01670 603 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 506 565 IPR017930 -
Gma18g01670 603 MobiDBLite consensus disorder prediction 172 193 - -
Gma18g01670 603 SUPERFAMILY Ubiquitin-like 318 411 IPR029071 -
Gma18g01670 603 MobiDBLite consensus disorder prediction 216 248 - -
Gma18g01670 603 SUPERFAMILY Homeodomain-like 512 593 IPR009057 -
Gma18g01670 603 MobiDBLite consensus disorder prediction 403 430 - -
Gma18g01670 603 Gene3D - 500 602 - -
Gma18g01670 603 MobiDBLite consensus disorder prediction 401 430 - -
Gma18g01670 603 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 603 IPR031105 -
Gma18g01670 603 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 603 - -
Gma18g01670 603 SMART sant 510 563 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01670 Gma-Chr18 46880140 46883848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01670 - - gmx:100801280 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01670 18 46880140 46883848 Gma18g00356 18 3057931 3063089 ECH
Gma18g01670 18 46880140 46883848 Gma11g02219 11 37478067 37483327 ECH
Gma18g01670 18 46880140 46883848 Gma18g01670 18 46880140 46883848 ECH
Gma18g01670 18 46880140 46883848 Gma11g01255 11 10690299 10695851 ECH
Gma18g01670 18 46880140 46883848 Gma12g00553 12 4626308 4629990 ECH
Gma18g01670 18 46880140 46883848 Gma15g00355 15 3011029 3015002 ECH