Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma10g00729 ATGAGAACAGGAAGCTGCGCCGTGCAACAGGGTCTAACCCCAGAGGCCGCGAGCATAGTGAAGCAAGCGGTGACGCTTGCGAAGCGTCGCGGCCACGCGCAGGTGACGCCCCTCCACGTGGCGAACACCATGCTTTCCATCACCAACGGGCTTCTGAGAACAGCTTGTCTCCAATCCCACTCTCACCCTCTCCAGTGCAAGGCCTTGGAGCTTTGCTTCAACGTTGCCCTAAATCGCTTACCGGCTTCGACTTCTTCGAGTCCCATGTTGCAAGGCTCTCACCACCACCACTCTCACGCGTGCCCCTCTATCTCAAACGCCCTTGTTGCAGCTTTCAAACGCGCTCAAGCACACCAACGACGTGGATCTGTTGAGAATCAGCAACAGCCTCTCTTGGCAGTGAAAATTGAACTCGAGCAACTCATTATTTCGATCTTGGATGACCCTAGTGTTAGCCGAGTCATGAGAGAAGCTGATTTCAATAGCACACAAGTTAAAAGCAACGTTGAACAAGCGGTTTCTTTGGAAATATGCTCTCAGAATAATGGTAGTGGTAATAACAATAACAACAATAATAATAAGGCAGAGGAAAATAATAGTAGTAGTGGAGAGAAAGGGTTGGTGTTGGATCCTATTAGGGTTGAGGATGTTGCTAGTGTTATTGAAAATTTGGGGTGTGAGAGAAAGAGAAGTGTTGTGATTGTGGGAGAGTGTGTTACTAGCCTTGAAGGTGTAGTTAGGGGAGTGATGGAAAAGATTGATAAAGGGGATGTTGGTGATGAGTGTACTCTCAGGGGTGTCAAGTTTATCTCTCTTTCTCTTTCTTCTTTTGGGAATGTTTCAAGAGTGGAGGTGGAGCAAAAGGTGGAGGAGCTTAGGGGTCTTGTGAAGGCAAGTGAACATAGCAAAGGGTATGTTTTGTATTTGGGGGATCTCAAGTGGGTGTTAGATTTTAGGGCTAGCGGATCACAAGGCAGAGGGTGTTATTGTCCTGTGGATCACATGGTTGGGGAGATTGGGAAGCTTGTGAATGGGACTGAAGAGAATGGTGGAAGGTTTTGGGTTATGGGTGTTGCCACTTTTCAAGCTTACATGAGATGCAAAAATGGCCAGCCATCGTTGGAGACTCTTTGGTGTCTTCATCCTATCACTATTCCTGCTGGAAGCTTGCGCTTGAGTCTCATCACTGACAGTGGTCTACAAGACCAGCCCACAAACAAGAAAGCTGACAACAGAACTAGCTGGCTCTTACTTGAAGGAGTGGGGGATGATCAGAAACAACAAGCTTGCTTCGCGGAACCTTCCACAAAGAATGAGACCATCACCGAAGTTCGAAGCTTGCAAAGCAGTAGTACTTGTAATAGTGACTCCTCAAGTTCAACCCTTCCTGCATGGCTCCAACAGTACAAAAATGAGAATAAAGGAATCAACTATAATGATCAGAACTCTGTCCCAGTGGGAGAGCTTTGCAAAAAGTGGAAATTTATGTGTAGTTCAATCCAAAAGCAACCTTATCCTTCCGACAAAACCATCACATTATCCTCGGTGTCACCTTCTTCATCAACCTCAAACTTCTCATACGGACAACAACATCCTAATTTGCACCAAACCCATAACGAGTGGCAAGTGGCTGAACCACCCAAAGATTCATTAAACAACCACCATTTCTGGATCTCCAACAATGGTTCCAACAACACCAATGAACCCACTTTGAGAGTGTACATTCCAGAGAACAATAAGCAACCATTCTCATCACCAAATCCAAGTTCTAACCCTAATTCCACTTCTTCCAGTGACATCATGGAAGTGGAACACGTGAGCAAGTTCAAAGAGTTAAACTCGGAGAATCTTAAAACCTTATGCAATGCTTTGGAGAAAAAATTGCCGTGGCAGAAAGACATAATACCCGAAATTGCGAGCACCCTTTTGCAATGCCGTTCTGGCATGGTGAGAAGAAAAGGGAAAGTGATGATAAACAGTGAAGAAGTGAAAGAAGAAACGTGGTTGTTCTTCCAAGGTGTTGATGTTGAAGCCAAGGAGAAAATAGCAAGAGAATTGGCTCGGCTTGTTTTCGGGTCCCAAAACCACGTCGTTTCGATTGCACTTAGCACTTTTGCTTCAACAAGAGCAGATTCTACTGAGGATTATAGCAGGAACAAAAGATCAAGAGAAGAAACAAGTTGCAGTTACATTGAAAGGTTCGTAGAAGCAATGGCTTCTAACCCTCATAGGGTGTTTCTTGTTGAAGATATAGAGCAAGCAGATTATTGTTCTCAACTTGGTTTCAAAAGGGCCATTGAGAGGGGAAGAGTGGTGGATTCAAAAGGTGAAGAGGTTGCACTTCGTGATGCTATCATCATTCTAAGCTGTGAAAGTATCAGTTCTAGGTCAAGGGCTTGTTCTCCCTCGGTCAAACAAAAATCGTTAACCGAGGTAGAAATGAATGGCGACATTAATAATGCCACTTTGGAGGAGACAAGCCCTTTTGTTTCTTTGGATTTGAATATTTCCATTGATGATGAAAACAATGTTGAGGATAGGTCAGAGGATGAAATTGGGCTTCTTGAATCGGTAGACGGAAAAGTTATCTTCAACTTTGAGGAATTGTGA 2610 0.4452 MRTGSCAVQQGLTPEAASIVKQAVTLAKRRGHAQVTPLHVANTMLSITNGLLRTACLQSHSHPLQCKALELCFNVALNRLPASTSSSPMLQGSHHHHSHACPSISNALVAAFKRAQAHQRRGSVENQQQPLLAVKIELEQLIISILDDPSVSRVMREADFNSTQVKSNVEQAVSLEICSQNNGSGNNNNNNNNKAEENNSSSGEKGLVLDPIRVEDVASVIENLGCERKRSVVIVGECVTSLEGVVRGVMEKIDKGDVGDECTLRGVKFISLSLSSFGNVSRVEVEQKVEELRGLVKASEHSKGYVLYLGDLKWVLDFRASGSQGRGCYCPVDHMVGEIGKLVNGTEENGGRFWVMGVATFQAYMRCKNGQPSLETLWCLHPITIPAGSLRLSLITDSGLQDQPTNKKADNRTSWLLLEGVGDDQKQQACFAEPSTKNETITEVRSLQSSSTCNSDSSSSTLPAWLQQYKNENKGINYNDQNSVPVGELCKKWKFMCSSIQKQPYPSDKTITLSSVSPSSSTSNFSYGQQHPNLHQTHNEWQVAEPPKDSLNNHHFWISNNGSNNTNEPTLRVYIPENNKQPFSSPNPSSNPNSTSSSDIMEVEHVSKFKELNSENLKTLCNALEKKLPWQKDIIPEIASTLLQCRSGMVRRKGKVMINSEEVKEETWLFFQGVDVEAKEKIARELARLVFGSQNHVVSIALSTFASTRADSTEDYSRNKRSREETSCSYIERFVEAMASNPHRVFLVEDIEQADYCSQLGFKRAIERGRVVDSKGEEVALRDAIIILSCESISSRSRACSPSVKQKSLTEVEMNGDINNATLEETSPFVSLDLNISIDDENNVEDRSEDEIGLLESVDGKVIFNFEEL 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma10g00729 869 SUPERFAMILY Double Clp-N motif 12 169 IPR036628 -
Gma10g00729 869 MobiDBLite consensus disorder prediction 577 598 - -
Gma10g00729 869 Pfam Clp amino terminal domain, pathogenicity island component 136 173 IPR004176 -
Gma10g00729 869 Pfam Clp amino terminal domain, pathogenicity island component 23 50 IPR004176 -
Gma10g00729 869 ProSiteProfiles Clp repeat (R) domain profile. 8 176 IPR004176 -
Gma10g00729 869 Gene3D - 209 384 IPR027417 -
Gma10g00729 869 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 868 - -
Gma10g00729 869 Gene3D - 9 174 IPR036628 -
Gma10g00729 869 Gene3D - 595 831 IPR027417 -
Gma10g00729 869 PANTHER PROTEIN SMAX1-LIKE 3 1 868 - -
Gma10g00729 869 MobiDBLite consensus disorder prediction 179 205 - -
Gma10g00729 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 792 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma10g00729 Gma-Chr10 8997349 9001602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma10g00729 - - gmx:100813578 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00729 10 8997349 9001602 Gma18g00246 18 2010302 2015492 ECH
Gma10g00729 10 8997349 9001602 Gma11g02331 11 38700191 38704926 ECH
Gma10g00729 10 8997349 9001602 Gma10g00729 10 8997349 9001602 ECH
Gma10g00729 10 8997349 9001602 Gma11g01945 11 24996611 25002502 ECH
Gma10g00729 10 8997349 9001602 Gma18g00586 18 5747518 5753846 ECH
Gma10g00729 10 8997349 9001602 Gma20g00718 20 27579794 27582577 GST
Gma10g00729 10 8997349 9001602 Gma02g01876 02 43529634 43533685 GST