Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g00246 ATGCCGACGCCCGTGGCAGCCGCGCGCCAATGCCTAACCCCCGACGCCGCCCGCGCCCTCGACGAGGCCGTCTCCGTCGCTCGCCGCCGCGGCCACGCCCAAACGACGTCGCTCCACGCCGTCTCCGCCCTCCTCTCCCTCCCCCTCCTCCGCGACGCCTGCTCCCGCGCCCGAAACTGCGCGTACTCCCCACGCCTCCAGTTCAAGGCCCTCGACCTCTGCCTCTCCGTCTCCCTCGACCGCGCCCCGTCCTCTCACAACCACGCCTCCTCCGACCACGACCCTCCCATCTCGAACTCTCTCATGGCCGCAATAAAACGCTCTCAAGCCAACCAACGCCGCCACCCCGATAACTTCCACTTTTACCCTCACCACCAAACTCAGCAGCAACCGTTTTCTGTTTCTTCTGTCAAAGTAGAGCTTCAGCATTTGATCTTGTCAATCCTGGACGACCCCGTGGTGAGTCGCGTTTTCGCCGAAGCCGGTTTTCGAAGCTCCGATATTAAGCTCGCCATCCTCCGCCCTCTCCGCCCCCGCGGCCCGCCGATTTTCCTCTGCAACTTATCCGAGCCGCCGCGAAGGTTCCCCTTCTTTTTCGGCGGTGGTGACGAGGACGGCGGCGGCGGAGGAGAGAATTTCCGGCGAATCGGGGAGGTTCTGGTCCGGAGCAGGGGGAAGAATCCGCTTCTTCTCGGCGCGTGTGCGGGCGACGCTCTGCGTGGCTTTGCCGAGGCAGTGGAGAAACGGAGAGAAGGGGCTCTGCCGGTGGAATTGTCGGGGCTGCGCGTGGTTTGCATTGCGGAGGAGGTGGCGAGTGGGGACGCGGAGGTGGTGGGGAGGCGCGTGAGGGAGATTGGGAATTTGGCGGAGCAGTGTGTGGGGCCCGGTGTTGTGGTGAGTTTCGGGGACTTGAAGGGTTTTGTGAGCGACGATGAAGAAGGTGgtggtgagggacagagtttgaggggtgtggttggagaattagcgaaattgttgcaggttcattatgacaagttttggttgatgggtgctgctgctagttacgataattacttgaatttcgtggggaagtttccttctatagagaaagattgggatttgcagcttctgcctattacctctgttaagcctctttccgaatcctatcaccgtcccaggtccagcttaatggattcatttgtACCGTTTGGTGGCTTCTTTTCGTCACAGTCTGATTTGAAAGCTCCACTGAGTGGCTCGTTTTATTGTGTTCCCCACTGTCACCAGTGTGGTGGGGAAAGGTGTGAACATGAAGTCCTTGCTTCGTCCAAGGAAAGGTTTTCTGCTTCTTCAGCTGCTGATCCGCATCAATCTAACTTGCCTCCGTGGTTGCAGATTGCAGAATTTGGCTCAACAAAGGGGTTGAATGTTAAGACCAAAGATAATGGTGTTTTGCTCGATAGTAGTGAATCTGGGTCACTGCATAAGAACTTTGACAAGTTATCCCAGCATCTGCACCAGCGAGATGCAATTACTTTTCCAACTGTTGTGGGGTTTCATTGTGGTGCTGAAAAGAAAAAGGAAGATACTGACAATTGCAGCAGCAAATCACCTAGTGAATACATCAATCTCAACTCCCATGTACCTGTTGGCATGCAAATGATGCCTACATCACAATCAAGTAGTCCTTTTCCTGCAGTTTTCATGGCAAAGCAGGAGAAATATAATTCAAAACTTGCTGAGATGTTCCAGAAAGTGGAAGATCACGAGTCAGGTGACCAAAGATCATGCAACATGTCCAATTCAAGTGTGTGTGATGGTAGTCAAATGTCTCCCACATCTGTAACTTCTGTAACCACAGATCTTGGGTTAGGAATATACTCTTCTCCTACCAGCAATAAATTGAAGAAACCCGCTGTTCAATATACAATGGAGCCTCCAAAGGAAATCCCAAGTCGATTTTCTCAAAACTTTAATTTGGCTGATGGGAATATCTTGAAGCATTCATCCCAGTCTTCATCCTGCTTAAGTTTTGACTATTGTGGACAAGTTGATGCAAAAAATCCCAAAATTCTTTTTGAAGTTCTTTCCAAGGAGGTAACCTGGCAAGATGAAGCTTTACGGGCTATCATCAAAACAATTGTTTGCAGCCCAACAAAGAGGGTTAAACACCGTGGACCAAATCAGCCTGGGGACATCTGGATGAATTTTGTTGGATCTGATAGACTTGGTAAAAAGAAAATTGCTGTTTCTCTAGCTGAGCTATTGTATGGTAGCCGTGAAAGCTTTATTTTTGTGGATCTAAGTTCTGAAGAAATGAAAGGATGCGATGTGAAATTCAGAGGGAAGACTGCCCTTGATTTTATTGTAGGGGAGTGTTGCAAGAAACCCCTGTCTGTGGTTTTCCTTGAAAATGTAGAAAAGGCAGATATTCTAGCTCAAAATAGTTTGTCTCTAGCCATCAAGACAGGAAAAATTTCAGACTCACATGGACGAGAAGTTAGTGTAAACAATACAATGTTTGTTTTTTCTTTCTCAGATTACCAAAATAGTTTGATGCCAAGAGGGGAACCTTCCAACTATTCTGAGGAAAGAATACTGAGGGCAAAAGGGGGAGGTATCAAGATAAAAGTTGAACATGTGATTGGAGACATCAGAAGCCAAAGCATCAGTGTAACTAACAATTCAATACATGCGGTTCCTAATCTAAATATCCTAAACAAACGAAAGTTGATTGGTGACGATAAATTTCATGATCTGCATTTTCTCTCTGATACAGCTAAAAGGGCACATACAACATCAAATTGGCTGTTAGATTTGAATCTCCCAGCAGAAGAGAATGAACAGAAACAAACAAATGATGGAAACTCTGATCATGTCTCAACTGAGAACCAAAACCTTTGGTTGCAAGATTTGTGTGATCTGGTTGATGAAACAGTTGTTTTTAAACCTTATGATTTTGAAGCACTTGCGGATAGAGTGTTGAAAGTGATCAGAAGTAACTTCAACAAAATTCTTGGATCCGAGTGTGCATTGCAGATCCAGACAGAAGTCATGGACCAATTTCTTGCAGCTCAATATGTTTCAGACCGGGATAGGGAGGTGGAGAACTGGGTGGAGGAAGTTCTATGTGAAGGATTTACAGAAGTACAGAGAAGGTACAACCTCACTGCTAGTTCTATTGTAAAACTTTTTACGTGTCCTGAGCAAGCTGCTGGTGTACACCTTCCCCCAAGGATAATTTTAGACTGA 3231 0.4444 MPTPVAAARQCLTPDAARALDEAVSVARRRGHAQTTSLHAVSALLSLPLLRDACSRARNCAYSPRLQFKALDLCLSVSLDRAPSSHNHASSDHDPPISNSLMAAIKRSQANQRRHPDNFHFYPHHQTQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLRPRGPPIFLCNLSEPPRRFPFFFGGGDEDGGGGGENFRRIGEVLVRSRGKNPLLLGACAGDALRGFAEAVEKRREGALPVELSGLRVVCIAEEVASGDAEVVGRRVREIGNLAEQCVGPGVVVSFGDLKGFVSDDEEGGGEGQSLRGVVGELAKLLQVHYDKFWLMGAAASYDNYLNFVGKFPSIEKDWDLQLLPITSVKPLSESYHRPRSSLMDSFVPFGGFFSSQSDLKAPLSGSFYCVPHCHQCGGERCEHEVLASSKERFSASSAADPHQSNLPPWLQIAEFGSTKGLNVKTKDNGVLLDSSESGSLHKNFDKLSQHLHQRDAITFPTVVGFHCGAEKKKEDTDNCSSKSPSEYINLNSHVPVGMQMMPTSQSSSPFPAVFMAKQEKYNSKLAEMFQKVEDHESGDQRSCNMSNSSVCDGSQMSPTSVTSVTTDLGLGIYSSPTSNKLKKPAVQYTMEPPKEIPSRFSQNFNLADGNILKHSSQSSSCLSFDYCGQVDAKNPKILFEVLSKEVTWQDEALRAIIKTIVCSPTKRVKHRGPNQPGDIWMNFVGSDRLGKKKIAVSLAELLYGSRESFIFVDLSSEEMKGCDVKFRGKTALDFIVGECCKKPLSVVFLENVEKADILAQNSLSLAIKTGKISDSHGREVSVNNTMFVFSFSDYQNSLMPRGEPSNYSEERILRAKGGGIKIKVEHVIGDIRSQSISVTNNSIHAVPNLNILNKRKLIGDDKFHDLHFLSDTAKRAHTTSNWLLDLNLPAEENEQKQTNDGNSDHVSTENQNLWLQDLCDLVDETVVFKPYDFEALADRVLKVIRSNFNKILGSECALQIQTEVMDQFLAAQYVSDRDREVENWVEEVLCEGFTEVQRRYNLTASSIVKLFTCPEQAAGVHLPPRIILD 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g00246 1076 Gene3D - 10 175 IPR036628 -
Gma18g00246 1076 Gene3D - 662 874 IPR027417 -
Gma18g00246 1076 ProSiteProfiles Clp repeat (R) domain profile. 8 181 IPR004176 -
Gma18g00246 1076 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1075 - -
Gma18g00246 1076 MobiDBLite consensus disorder prediction 581 604 - -
Gma18g00246 1076 MobiDBLite consensus disorder prediction 588 604 - -
Gma18g00246 1076 PANTHER PROTEIN SMAX1-LIKE 8 1 1075 - -
Gma18g00246 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 682 1010 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g00246 Gma-Chr18 2010302 2015492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g00246 - - gmx:100786125 2078.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00246 18 2010302 2015492 Gma11g02331 11 38700191 38704926 ECH
Gma10g00729 10 8997349 9001602 Gma18g00246 18 2010302 2015492 ECH
Gma02g01876 02 43529634 43533685 Gma18g00246 18 2010302 2015492 ECH
Gma11g01945 11 24996611 25002502 Gma18g00246 18 2010302 2015492 ECH
Gma18g00586 18 5747518 5753846 Gma18g00246 18 2010302 2015492 ECH
Gma18g00246 18 2010302 2015492 Gma18g00246 18 2010302 2015492 ECH
Gma18g00246 18 2010302 2015492 Gma11g02331 11 38700191 38704926 GST
Gma18g00246 18 2010302 2015492 Gma14g00499 14 4761967 4762874 PCT
Gma14g00499 14 4761967 4762874 Gma18g00246 18 2010302 2015492 PCT