Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma20g00718 ATGAGAGCAGGAGTTTGCAGCATACAGCTACAGGCTCTGACACCAGAGGCTGCAACCCTAGTTAAACAAGCTGTTACTCTTGCCACAAGAAGAGGTCATGCTCAAGTGACCCCTCTTCACATTGCCACTGTCATGCTTGCTACTTCCACAGGCCTTCTCCGCAAAGTTTTCCTTCAATGCCACTCTCACCCTCTCCAATACAAGGCACTAGAACTTTGCTTCAATGTTTCCCTCAACCGTTTGCCAGCACCCACACCAAGCCCTCTTCTGAGTCCTCCATATTCCACCACTCCCTCACTTTCCAATGCCTTGGTTGCAGCCttcaagcgtgctcaggctcaccaacgccgcggttcgattgagaaccagcagcaacccattctggccttgaagattgagatggagcagctcatagtctctatccttgatgaccctagcattagtagggtcatgagagaagctggtttctctagtgcccttgttaaaacaagggttgaacaagcTGTTTCAATGGAAGTTTGTTCACAGCACCAAGCTTCCAAGGAAAACACCACCACCAAGCTTCAAGTTCTTGGTGGTAGCAGCAGCATGTCCCCATCTAGATCTTTTGGTCAATTTGGGGCATCATTCAAGTCTATAGACCATGTTGGTGATCATGTAGATGATGTAACTAGTGTTTTGAGTGAACTTGTGAGCAAGAGGAGAAACACAGTCATTGTTGGGGAGAGTCTTGCTAGTGCTGAGGGAGTAGCTAGGGGAGTGATGGAAAGGTTAGAGACAGGGAGTGTTCAAGGAGAGTTGAGGTTTGTGCAATTTGTGAGTCTTCCTCTTGTCTCCTTTAGGAACATTAGCAAGGAGGAGGTTGAAAGGAAGCTTGTGGAGCTTAGAAACCTAGTAAAAAGTCATGTGGGGAGAGGGTTAATTCTATACTTGGGTGATCTGAAATGGTTGTTTGAGTTCTGGTCTAGTTATTGTGAGCAAAGAACAAACTATTACTGTTCTGTGGAGCATATGGTGATGGAGCTTAAAAAATTGATTAGTGGAAATAGGGAGAATAGTAGGTTGTGGCTTATGGGGATAGCAACTTTTAGAACATACATTAAGGGCAAAGCATGTCACCCCTCCCTTGAAACTATTTGGGATCTTCACCCCTTTACAGTTCCAGTTGGTAGCTTGAGCCTTGCTTTAAATTTTGATAGTGATTTTCATGTTCAGGAGAGAAGCAAGGTAACATTCAAGGACGAATCTTTTGAAGAACGAGCCAAAGTGCGCAAGTATCTAACTTGCTGCAGAGATTGCTCATTGAATTTTGAAAAAGAAGCTAAAAGCATTGCTAGTAGTTTTACTATAAGCAAGAGAGATTGCACCACTAGCTTGCCAACATGGCTCAAAAATTGCAAGGCAGAGAGAAGTCGCATGATGGAGGATCAGGAAAATGCTAAGCTTTGGGATATTTGCAAGAAATGGAACTCATTTTGCAGTTCAGCACATGGATTTCCGTCCAATCTTGAGAAACCATTTTTGTTCATTTCATCCTCTCCTTCATCCCCTACTTCAGTCTCTTCACATGAAAGAAAGCCTAGTTTAAATCTGAGCCACCTAAACTGGCCAGTCATTTCTGAACGAAAAGAAGTACCTAAAGAATGTGAGTTATACACTGAGACTACTGTTAGAAATGATTCCTATGAAGGAAACTTGATAATGTTCATGCCAGAGAGGAACCATCCTAAGCCAGACCTTTTATCAAATCCAAATTCTAGCCCCAATTCCGCTTCTTCAAGTGAGGCAGTGGAAGGTTTGGACAGCACTCAAATGTTCAAGGACCATAATGATGAAAATCTGAAGATTCTATGTGATGCATTGGAGAAAAAGGCTCCACAACAGAAAAAAACAGTGAAGGAGATTGCAAGCACTGTGCTTCTTTGCAGGTCAGGAATGAGAAAAGTAGGGAATCACTTAGTGAAGAGAGATGATAGGCAAGAAACTTGGTTTTTCTTTCTAGGTGTGGATTCTCAAGCAAAAGAAATGGTCTCAAAAGAGCTAGCTAAAGTAATTTTTGGCTCTTATAGTAACTTTGTCTCCATTGGTTTAAGCTGTTTCTCTTTAACTCATGAGGAGTCCAAAAATAAAAGGGCAAGAGATGAGTTTGGTGGCAGTTATCTTCAGAGATTTGGGGAAGCACTGAATGAGAATCCTCATAGGGTGTTCTTTATGGAAGATTTGGAGCAAGTTGATCACTTTTCTAAAAAGGGTGTTAAGCAAGGAATTGAAAGTGGAGCTATAACCCTTCCTGGTGGTGAATCTGTGCCTCTCAAGGATGCAATTGTCATTTTCAGTAGTGAATGCTTCAGTTCAGTACTGTCAAGAGCTTGTTCTCCTGCAAGAACTACTTCTCCATTTTCAGATGAAGACATGAAAGAGAATATTAACAACTCAGAGGAGAAAATTTCATGCCTCTCTTTGGATCTGAACATGGCCATTGAAGTTGATGTGCAAAAAAATGTGCATTTAGATGGAGAAACTGATGAGATCCTAGAGTTAGTTGATAAGAAAATTAATTTTAAAATATGA 2571 0.3847 MRAGVCSIQLQALTPEAATLVKQAVTLATRRGHAQVTPLHIATVMLATSTGLLRKVFLQCHSHPLQYKALELCFNVSLNRLPAPTPSPLLSPPYSTTPSLSNALVAAFKRAQAHQRRGSIENQQQPILALKIEMEQLIVSILDDPSISRVMREAGFSSALVKTRVEQAVSMEVCSQHQASKENTTTKLQVLGGSSSMSPSRSFGQFGASFKSIDHVGDHVDDVTSVLSELVSKRRNTVIVGESLASAEGVARGVMERLETGSVQGELRFVQFVSLPLVSFRNISKEEVERKLVELRNLVKSHVGRGLILYLGDLKWLFEFWSSYCEQRTNYYCSVEHMVMELKKLISGNRENSRLWLMGIATFRTYIKGKACHPSLETIWDLHPFTVPVGSLSLALNFDSDFHVQERSKVTFKDESFEERAKVRKYLTCCRDCSLNFEKEAKSIASSFTISKRDCTTSLPTWLKNCKAERSRMMEDQENAKLWDICKKWNSFCSSAHGFPSNLEKPFLFISSSPSSPTSVSSHERKPSLNLSHLNWPVISERKEVPKECELYTETTVRNDSYEGNLIMFMPERNHPKPDLLSNPNSSPNSASSSEAVEGLDSTQMFKDHNDENLKILCDALEKKAPQQKKTVKEIASTVLLCRSGMRKVGNHLVKRDDRQETWFFFLGVDSQAKEMVSKELAKVIFGSYSNFVSIGLSCFSLTHEESKNKRARDEFGGSYLQRFGEALNENPHRVFFMEDLEQVDHFSKKGVKQGIESGAITLPGGESVPLKDAIVIFSSECFSSVLSRACSPARTTSPFSDEDMKENINNSEEKISCLSLDLNMAIEVDVQKNVHLDGETDEILELVDKKINFKI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma20g00718 856 MobiDBLite consensus disorder prediction 573 599 - -
Gma20g00718 856 ProSiteProfiles Clp repeat (R) domain profile. 10 172 IPR004176 -
Gma20g00718 856 Coils Coil 285 305 - -
Gma20g00718 856 Gene3D - 9 171 IPR036628 -
Gma20g00718 856 SUPERFAMILY Double Clp-N motif 13 164 IPR036628 -
Gma20g00718 856 Pfam Clp amino terminal domain, pathogenicity island component 24 60 IPR004176 -
Gma20g00718 856 Pfam Clp amino terminal domain, pathogenicity island component 132 169 IPR004176 -
Gma20g00718 856 PANTHER DOUBLE CLP-N MOTIF P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 856 - -
Gma20g00718 856 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 856 - -
Gma20g00718 856 MobiDBLite consensus disorder prediction 579 599 - -
Gma20g00718 856 Gene3D - 592 850 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma20g00718 Gma-Chr20 27579794 27582577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma20g00718 - - gmx:100775479 1637.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00729 10 8997349 9001602 Gma20g00718 20 27579794 27582577 GST