Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva02g02048 ATGTCGTCTGCTGGCGTCACTACACTTAGTCCACTTTCCAGGGAGCCTTTACTGTCTCCAAATGGATTCCCTACCCCCTCACACCTGTCTTTGGATGAATCGATTTGCATATTTCTCTCCTTTTCGGGGTCTATGACTCCATTGCGTGTTTTGGAGTGTGATACCATTGAGTCTGTGAAGCTCAAAATCCAGACCTGTAAGGGTTTTGTAGTCAAGAATCAGAAGTTGGTTTGTAGTGGCCGGGAACTTGCACGAAGCAATACTTTACTCAGGGATTATGGGGTAGCAGAAGGAAATGTTTTGCATTTGGTGCTCAAACTGTCAGAACTTCAGGTCATCAGTGTGAGAACTTCTAGTGGAAAGGAGTTTACGTTCCACGTGGAACGAGGTAGGGATGTTGGATATGTGAAAAAACAGATTGCTAAAAAGGAGAAACAGTTTGCTGATCCTGAAGATCAGGAAGTTGTGTGTAATGGGGAACAGCTCGAGGACCAGTGGCTTATTGATGATATCTGCAAACGTAACGATGCAGTGATACATCTGTTGGTCAGAAAATCTGTAAAAGTCCGTGCAAGACCGGTTGAGAAAAATTTTGAGCTGTCTTTTGTAGCAACTGAGTTGAATAATAGGAAAAATTATGATGTTAAGGGAGATACTAATGGGAGAAACTATGATGTCAGTGAAGAAAATGCAAGGGAGTACAAAGTCTTTGAAAGTATTGTGCCAAAAAAGTCTCTCAATAGAGATATTCTTCTGGAGCCAGTTATTATTAACCCCAAGATTGAATTAGCTTCAGTTATTTTGGATATGATAAAGTCTACTTATGATGGACTTCATGCTGGGAATAATCCGGTCAGATCCACCGAGGGTACAGGGGGAGCTTATTTTATACTGGATTCAACTGGGAAAAAGTATCTATCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTAAATAATCCTCGAGGTTTGCCATTATCAATGGATGGGGAAGGATTAAAAAAGGGTACGAGAGTTGGCCAAGGAGCATTCAGGGAAGTTGCAGCTTACATTTTGGATCATCCTATTACTGGGCGCCGCACATTATTTGGTGATGAATTGGGTTTTGCTGGGGTTCCCCCAACAGTTCTGGTTAAGTGCTTGCACAAAGGATTTAACCATCCAGGGGACTTGACTCCTAAGATTGGCTCCATGCAGATGTTTATGGAGAATAACGGAAGTTGTGAGGATATGGGCCCTGGGGCTTTCCCTGTGGAGGAAGTACACAAAATCAGCGTATTGGATATAAGACTGGCAAATGCGGATAGGCATGCAGGAAATATTTTACTTGGCACTGATAAGGAAAACCAGACTGTGCTGATTCCAATTGATCACGGATACTGCTTGCCGGAAAGTTTTGAAGATTGTACCTTCGAATGGCTTTATTGGCCACAAGCTCGGCAGCCATACTCTCGAGAGACTGTTGACTACATCAAGTCACTGGATGCTGAGGAAGACATTGCCCTTCTCAAGTTCCATGGATGGGATTTGCCAGTTGAATGTGCCCGTACTCTTCGGATTTCAACCATGCTTCTGAAGAAAGGAGTTGAGAGAGGGCTCACACCCTCTGCTATTGGAAGCTTAATGTGCAGGCAATCCATTAACAGGCAATCTGTGATTGAGAAAATTGTACGAGAAGCAGAGGATTCTGTGCTTCCCGGCACAAGTGAAGCTACATTTCTGGATGCTGTTTCTCAGATCATGGACAAGCACCTTGATGAGATTGCCAATTCCCGTTCTCTTACTTGGAGTTG 1796 0.4337 MSSAGVTTLSPLSREPLLSPNGFPTPSHLSLDESICIFLSFSGSMTPLRVLECDTIESVKLKIQTCKGFVVKNQKLVCSGRELARSNTLLRDYGVAEGNVLHLVLKLSELQVISVRTSSGKEFTFHVERGRDVGYVKKQIAKKEKQFADPEDQEVVCNGEQLEDQWLIDDICKRNDAVIHLLVRKSVKVRARPVEKNFELSFVATELNNRKNYDVKGDTNGRNYDVSEENAREYKVFESIVPKKSLNRDILLEPVIINPKIELASVILDMIKSTYDGLHAGNNPVRSTEGTGGAYFILDSTGKKYLSVFKPIDEEPMAVNNPRGLPLSMDGEGLKKGTRVGQGAFREVAAYILDHPITGRRTLFGDELGFAGVPPTVLVKCLHKGFNHPGDLTPKIGSMQMFMENNGSCEDMGPGAFPVEEVHKISVLDIRLANADRHAGNILLGTDKENQTVLIPIDHGYCLPESFEDCTFEWLYWPQARQPYSRETVDYIKSLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGVERGLTPSAIGSLMCRQSINRQSVIEKIVREAEDSVLPGTSEATFLDAVSQIMDKHLDEIANSRSLTWS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva02g02048 598 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 592 - -
Bva02g02048 598 SUPERFAMILY Protein kinase-like (PK-like) 384 589 IPR011009 -
Bva02g02048 598 Pfam Phosphatidylinositol 3- and 4-kinase 290 536 IPR000403 -
Bva02g02048 598 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 592 IPR044571 -
Bva02g02048 598 SUPERFAMILY Ubiquitin-like 107 185 IPR029071 -
Bva02g02048 598 Pfam Ubiquitin family 37 107 IPR000626 GO:0005515
Bva02g02048 598 Pfam Ubiquitin family 113 185 IPR000626 GO:0005515
Bva02g02048 598 SMART ubq_7 35 106 IPR000626 GO:0005515
Bva02g02048 598 SMART ubq_7 111 184 IPR000626 GO:0005515
Bva02g02048 598 CDD Ubl_ubiquitin_like 113 182 - -
Bva02g02048 598 ProSiteProfiles Ubiquitin domain profile. 113 185 IPR000626 GO:0005515
Bva02g02048 598 Gene3D - 112 186 - -
Bva02g02048 598 ProSiteProfiles Ubiquitin domain profile. 54 106 IPR000626 GO:0005515
Bva02g02048 598 Gene3D - 27 111 - -
Bva02g02048 598 PRINTS Ubiquitin signature 44 64 IPR019956 -
Bva02g02048 598 PRINTS Ubiquitin signature 87 108 IPR019956 -
Bva02g02048 598 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 281 573 IPR000403 -
Bva02g02048 598 SUPERFAMILY Ubiquitin-like 32 107 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva02g02048 Bva-Chr2 21353568 21356518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva02g02048 1 590 Acyl Lipid Metabolism Gene Families AT5G24240 57.047 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva02g02048 - - gmx:100815111 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva02g02048 02 21353568 21356518 Bva12g01954 12 15501775 15506089 ECH
Bva02g02048 02 21353568 21356518 Bva06g02973 06 18535719 18539741 ECH
Bva02g02048 02 21353568 21356518 Bva02g02048 02 21353568 21356518 ECH
Bva02g02048 02 21353568 21356518 Bva08g01928 08 12943896 12946798 ECH
Bva08g00040 08 227314 231215 Bva02g02048 02 21353568 21356518 ECH
Bva11g02230 11 18048336 18051088 Bva02g02048 02 21353568 21356518 ECH