Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva08g00040 ATGTCTGTTGCCGATGTTGTTTTTAGTCCGATCTGTAAAAGGTCGGCACATTGTCAAGGGAAGGTTGGGTCTTGTTCTGGTGAGTCCATCCTAATTTACCTTACGGTGGACGGCACTGTGATCCCCATGAGTGTGTTGGAGTCCGACTCAATAGCGTCGGTCAAAGTCAGGATTCAAACATGTAAAGGGTTTGTAGTGAAGAAGCAGAAGTTAGTTTTTGGAGGCAGAGAGCTGGCCCGCAACGATACACCCATTGCCGAGTACGGTGTCACTAGTGGCAATGTTCTCCACTTAGTTCTTCGCCTTTCTGATCTTCTATTCATTGTCGTTAGGACCGTTTCTGGGAAGGAATTTGAATTTCATATTGATCGATATAGGAATGTGGGGTATCTTAAGCAACGCATTAAGAAGAAGGGGAAAGGTTTTGTTGATCTTGAGGATGAGGATGAGGATCATGACCTTTTTTGTAATGGGGAAAAGCTTGATGACCAGAGAGTCTTTCATGACATATCCAAAAGTAATGACGATGTGATTCATTTGCTGGTTCAAAAATCAGCTAAGGTTAGGGCTAAATCCATTCGGAATGATTTGGAGCTTTCCGTAGTGGCAACAACTTCAGGTGAGGTCCAACAAGTAGAGAATCGGAATCATCGGACAAGGCAACTTAATGAGGTAAAGGTTGTTGGAATTGGAAAGACACCATCTGGTCTAGATTTCTGGTTGGAACCAATCATTTTGAATCccaagatcaatttttttcctttcctttgggATATGATTAACTCCACGTTTGATGGTTTGAGGAAAGGAAATCACCCCATCAGGTCCTCTGAGGGCACAGGAGGGACTTACTTAATGCAAGATAAATCAGGTCTTGAGTATGTCTCAGTTTTTAAGCCCATTGATGAGGAGCCAATGGCTGTGAACAATCCACGAGGTCTACCAATATCATCTAATGGCGAGGGACTAAAGAGAGGAACAAAGGTGGGAGAAGGAGCTCTCAGGGAAGTTGCAGCTTACATTTTAGATCATCCTAGGAGTGGACCGCGTTTGATATCTGGTGAAGCAATAGGCTTTGCTGGTATTCCTCCAACTGTTATGGTGCAGTGCttacatgaaaaatttaaCCACCCAGAGGGATATGATTGCTCGTCAAAACATGTCAAGATCGGCTCATTGCAAATGTTCAGGGATCATGATGGTAACTGTGAGGACATTGGGCCAGGGGATTTTTCCGTGGAGCAAGTCCACAAGATCACCGTGTTTGATATAAGAATGGCTAATGCAGATAGGCATGCTGGCAATATTTTGTTCAAGAAAGAATCAGGTGGCCAGACTGTGCTCATCCCAATTGACCACGGTTACTGTCTACCCGATAAATTTGAAGATTGCACGTTTGACTGGCTTTATTGGCCACAAGCGAGCAAGCCTTATTCTCCTGATACCGTTGATTATATTAATTCCCTGGATGCCGAACAAGATATAGAGCTTTTGAAGCATTATGGATGGGATGTTCCACTTGAAGCTGCTCGAACACTTGGCATTTCCACAATGTTGCTGAAAAAGGGAGTTGAGAGAGGTCTAACTCCGTATGCCATTGGAAGCATTATGAGCAGAACAAATTTGAACCGGGAATCTGTAATTGAGGAGATCATTCGCGATGCCCAGAATTCCTTGCTACCTGACATGAGTGAAGCAGCATTTCTCGAAGCTGTCTCTCAGGTCATGGATGCACGCCTTGACAAGAAGTTAAGGTCTGAATTCTACTTAAGTGCCGATGGATTTAGGATTGAACACACAGAGGAGCTGGAACAGTCGTCATGTGTACATAGCAAGAGAAAAGATAATGCCGAGAGATTTACATACTGCGATGTTGTTTTATTTCCAGATAGAGCTATAAGCTCCAGTCTGGCACTTTCTATCCCTTCCTCCGCGGAGAGTGAAATCTCAGGTCTCAATAATTACAAGGCATTGGATTGGATATA 1985 0.4292 MSVADVVFSPICKRSAHCQGKVGSCSGESILIYLTVDGTVIPMSVLESDSIASVKVRIQTCKGFVVKKQKLVFGGRELARNDTPIAEYGVTSGNVLHLVLRLSDLLFIVVRTVSGKEFEFHIDRYRNVGYLKQRIKKKGKGFVDLEDEDEDHDLFCNGEKLDDQRVFHDISKSNDDVIHLLVQKSAKVRAKSIRNDLELSVVATTSGEVQQVENRNHRTRQLNEVKVVGIGKTPSGLDFWLEPIILNPKINFFPFLWDMINSTFDGLRKGNHPIRSSEGTGGTYLMQDKSGLEYVSVFKPIDEEPMAVNNPRGLPISSNGEGLKRGTKVGEGALREVAAYILDHPRSGPRLISGEAIGFAGIPPTVMVQCLHEKFNHPEGYDCSSKHVKIGSLQMFRDHDGNCEDIGPGDFSVEQVHKITVFDIRMANADRHAGNILFKKESGGQTVLIPIDHGYCLPDKFEDCTFDWLYWPQASKPYSPDTVDYINSLDAEQDIELLKHYGWDVPLEAARTLGISTMLLKKGVERGLTPYAIGSIMSRTNLNRESVIEEIIRDAQNSLLPDMSEAAFLEAVSQVMDARLDKKLRSEFYLSADGFRIEHTEELEQSSCVHSKRKDNAERFTYCDVVLFPDRAISSSLALSIPSSAESEISGLNNYKALDWI 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva08g00040 661 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 270 567 IPR000403 -
Bva08g00040 661 Gene3D - 16 104 - -
Bva08g00040 661 SUPERFAMILY Ubiquitin-like 105 188 IPR029071 -
Bva08g00040 661 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 582 IPR044571 -
Bva08g00040 661 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 582 - -
Bva08g00040 661 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Bva08g00040 661 SUPERFAMILY Protein kinase-like (PK-like) 426 583 IPR011009 -
Bva08g00040 661 ProSiteProfiles Ubiquitin domain profile. 106 187 IPR000626 GO:0005515
Bva08g00040 661 SMART ubq_7 30 101 IPR000626 GO:0005515
Bva08g00040 661 SMART ubq_7 106 183 IPR000626 GO:0005515
Bva08g00040 661 Pfam Ubiquitin family 35 102 IPR000626 GO:0005515
Bva08g00040 661 CDD Ubl_ubiquitin_like 108 181 - -
Bva08g00040 661 Pfam Phosphatidylinositol 3- and 4-kinase 279 532 IPR000403 -
Bva08g00040 661 Gene3D - 107 198 - -
Bva08g00040 661 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva08g00040 Bva-Chr8 227314 231215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva08g00040 1 582 Acyl Lipid Metabolism Gene Families AT5G24240 55.290 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva08g00040 - - gmx:100809172 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g00040 08 227314 231215 Bva08g00040 08 227314 231215 BWGD
Bva08g00040 08 227314 231215 Bva08g00040 08 227314 231215 ECH
Bva08g00040 08 227314 231215 Bva02g02048 02 21353568 21356518 ECH
Bva08g00040 08 227314 231215 Bva08g01928 08 12943896 12946798 ECH