Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02973 ATGGCCAGTGTAGCACTTGTTCCAGTGAATGAAGAATCTTTCAAATCCCATGGTAAATTCACCAGTTTCTGTGGTCCTAATTTGAGGGATTCCATTTTGATTTACCTAAGTGTTGGTGGATCTGTGATTCCCATGCATATTATGGAAACAGACTCAATTGCTTCAGTGAAGCTGAGAATTCAGACCTTTAAAGGCTTTTTTGTGAAGAAACAGAAACTGATTTTTGAAGGGAGGGAATTGGCTCGGAATAATTCTTGTGTCCATGATTATGGTGTGACCGATGGAAATGTCTTGCACTTGGTCCTCAGGCTTTCTGATCTTCAAGCTATTACTGTGAGGACCATGTGTGGAAAAGAGTTTGAGTTTTACGTTGAGAAGAGTAGGAATGTGGGTTATGTGAAGGAGCAGATTACAAGGAAGGGAAAGGGGCTTGTGGATCTTAAAGATCAGGAACTGATATGTGATGGCGAGGCACTTGAAGACCAGAGACTCATTGAAGATATCTGTAAGGATAATGATGCTACAATTCATTTGTTGATCAGGAGATCTGCTAAAGTAAGGACTAAGCCAATTCAGAAGGATTTTGAACTATCAATTGAGGCATCATGCACATATGATAAAGTGGCAAATTTAGGAATAGACCAGTTGGGGTCACTGTCTGTTACAAAGAAGGGCCTTGAAAGGGAACAATTGATTAGAGATTTTCTATTGGAGCCTATTCTTGTTAATTCCAAAATCAGACTTCCAATAAGGATCCAGGAGCTAATCAACAATACTTCTCAGGGGTTAGAGAAAGGCAATAAACCAATCCAATCTTCAGAAGGCTCAGGAGGAGCTTATTTCATGCAAGATTCATTAGGTTTAAAGTATGTCTCTGTTTTCAAGCCTATTGATGAGGAGCCTATGGCTGTTAATAATCCTCGAGTATTGCCTGTCTCTGTGGATGGGGAAGGCTTGAAGAAAGGTACACGAGTTGGACAAGGGGCATTCAGAGAGGTTGCAGCTTACATTTTGGATCATCCTAGGAATGGAACTCGCTCTTATTATAATAATGGGGAGGAGGGATTTGCTGGAGTTCCCCCTACGGTGATGGTCAAATGCTTGCATAAAGGATTCCATCATCCTAAAGGTTATAAATGCGATTCAAGTACTGTCAAAATAGGATCGCTTCAGATCTTTATGATGAACATTGGAAGTTGTGAAGACATGGGCCCTCGTGCATTTCCAGTGAAAGAAGTACACAAGATCTCAGTGCTGGACATAAGATTGGCAAATGCAGATAGGCATGCCGGGAACATTTTGATTGGCAGGGATAGTGAAGAGGGCCCAATCGTGCTTATACCAATCGATCATGGTTATTGCTTGCCCGAGAATtTTGAAGACTGCACTTTTGATTGGTTATACTGGCCACAAGCTCAGGAGCCTTACTCCCCGGACACCATTGACTATATTAAATCTCTGGATGCTGAAGAAGATATTAAGCTTCTAAAGTTCCATGGATGGGACCTTCCTCCTGAATGTGCTCGTGTCTTTCGTATATCAACGATGCTTCTAAAGAAAGGTGCAGAGAGAGGACTCTCTCCATTTACCATTGGAAACATTATGTGTAGGGAAACACTCAAGAAAAAATCTGTCATCGAGCAGATAATtcaagaagcagaagaagCTGATCTTCCAGGTTCAACTGAAGCTGCATATCTTGATCTTGTTTCAGAGATCATGGATAGTCGTTTAGGTGAGCTATCCCCGTG 1751 0.4112 MASVALVPVNEESFKSHGKFTSFCGPNLRDSILIYLSVGGSVIPMHIMETDSIASVKLRIQTFKGFFVKKQKLIFEGRELARNNSCVHDYGVTDGNVLHLVLRLSDLQAITVRTMCGKEFEFYVEKSRNVGYVKEQITRKGKGLVDLKDQELICDGEALEDQRLIEDICKDNDATIHLLIRRSAKVRTKPIQKDFELSIEASCTYDKVANLGIDQLGSLSVTKKGLEREQLIRDFLLEPILVNSKIRLPIRIQELINNTSQGLEKGNKPIQSSEGSGGAYFMQDSLGLKYVSVFKPIDEEPMAVNNPRVLPVSVDGEGLKKGTRVGQGAFREVAAYILDHPRNGTRSYYNNGEEGFAGVPPTVMVKCLHKGFHHPKGYKCDSSTVKIGSLQIFMMNIGSCEDMGPRAFPVKEVHKISVLDIRLANADRHAGNILIGRDSEEGPIVLIPIDHGYCLPENFEDCTFDWLYWPQAQEPYSPDTIDYIKSLDAEEDIKLLKFHGWDLPPECARVFRISTMLLKKGAERGLSPFTIGNIMCRETLKKKSVIEQIIQEAEEADLPGSTEAAYLDLVSEIMDSRLGELSP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02973 583 SUPERFAMILY Protein kinase-like (PK-like) 417 580 IPR011009 -
Bva06g02973 583 Gene3D - 29 107 - -
Bva06g02973 583 SUPERFAMILY Ubiquitin-like 37 105 IPR029071 -
Bva06g02973 583 SUPERFAMILY Ubiquitin-like 104 181 IPR029071 -
Bva06g02973 583 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
Bva06g02973 583 SMART ubq_7 32 103 IPR000626 GO:0005515
Bva06g02973 583 SMART ubq_7 108 181 IPR000626 GO:0005515
Bva06g02973 583 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 4 2 581 - -
Bva06g02973 583 Pfam Phosphatidylinositol 3- and 4-kinase 275 530 IPR000403 -
Bva06g02973 583 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 266 565 IPR000403 -
Bva06g02973 583 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Bva06g02973 583 Gene3D - 108 196 - -
Bva06g02973 583 Pfam Ubiquitin family 39 104 IPR000626 GO:0005515
Bva06g02973 583 Pfam Ubiquitin family 110 182 IPR000626 GO:0005515
Bva06g02973 583 CDD Ubl_ubiquitin_like 110 179 - -
Bva06g02973 583 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 581 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02973 Bva-Chr6 18535719 18539741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02973 1 582 Acyl Lipid Metabolism Gene Families AT5G24240 62.715 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02973 - - gmx:100812724 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01954 12 15501775 15506089 Bva06g02973 06 18535719 18539741 ECH
Bva02g02048 02 21353568 21356518 Bva06g02973 06 18535719 18539741 ECH
Bva08g01928 08 12943896 12946798 Bva06g02973 06 18535719 18539741 ECH
Bva06g02973 06 18535719 18539741 Bva06g02973 06 18535719 18539741 ECH