Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02230 ATGTCTATTGTTGATGTTGCCTTGAGGCCGATCTGTAAACAGTTGGCATATTGTCAAGGGAAGGTCGGGTCTTGTTCTGATGAATCCATCCTAATTTACCTTTGTGTGGGCAGCACTGTGATCCCCATGCGTGTTTTGGAGTCCGATTCAATAGCTTCAGTCAAAGTCAGGATTCAGACATGCAAAGGGTTTGTGGTGAAGAAGCAGAAGTTAGTTTTTGGAGGCAGAGAGCTGGCCCGCAACGACGCACTCATCACCGAGTATGGTGTCACTGGTGGTAATATTATCCATTTGGTTCTTCTCCTTTCTGATCTTCTATTCATTGTCGTTAGAACCATTCGTGGAGAGGAGTTTGAATTTCATATTGATCGACATAGAAATGTGGGATATCTTAAGCAACGCATTAAGAAGAAGGGAAAAGGTTTTGTTGATCTTGAGGATGAGGATCAAGACCTTTTCTGTAATGGGGAAAAGCTTGACGACCAGAGAGTTTTTCACGACATATGCAAAAGTAATAATGATGTGATCCATTTGCTGGTTAAAAAATCAGCCAAGGTTAGGGCTAAACCCATTCAGAATATTTTGGAGCTTTCCTTTGTTGCAACAACTTCAGATGAAGTCCAAGAAGCTAAGGTTGTTGGAAAGATATCTTCTGGTCTGGATTTCTGGTTGGAACCATTCATTTTGAATCCCAAGATCAAAATTTTCCCTTTCCTCTGGGATATGATGAACTCCACGTTTGATGGTTTGAAGAAAGGAAATCACCCCATCAGGTCCTCTGAGGGCACAGGAGGGACTTACTTCATGCAAGATGCGTCAGGTCATGAGTATGTTTCAGTTTTTAAACCCATTGATGAGGAACCGATGGCTGTGAACAACCCACAAGGTCTACCCGTGTCATCTAATGGCGAGGGTTTGAAGAGAGGAACCAAGGTGGGAGAAGGAGCTGTGAGAGAAGTCGCAGCTTACTTATTAGATCATCCTAGGAGTGGACCGCGTTTGATATCGGGTGAAGCAATAGGCTTTGCTGGTGTTCCTCCAACTATTATGGTACAGTGCttacatgaaaaatttaaCCATCCAGAGGGGTATGGTTGCTCATCAAAAGATGTAAAGATCGGGTCATTACAAACGTTCATGGATAACGATGGTAACTGTGAGGACATTGGGCCAGGGGCTTTTCCGGTGGAGCAAGTGCATAAGATCACTGTGCTTGATATGAGAATGGCTAATGCAGATAGGCATGCTGGCAATATATTGTTCAAGAAAGAAGCAGGGGGCCAGATTGTGCTCATCCCAATCGACCACGGCTACTGTTTACCAGATAAATTTGAAGATTGCACGTTTGACTGGCTTTACTGGCCCCAAGCAAGCAAGCCTTATTCTCCTGATACTGTTGATTATATTAATTCCCTCGATGCCGAACAAGATATAGAGATTTTGAAGCATTATGGATGGGATATTCCACATGAATGTGTACGAACACTTCGCATTTCCACTATGTTGCTGAAAAAGGGAGTTGAGAGAGGTCTCACTCCTTATGACATTGGAAGCATTATGTGTAGAGAAAATTTGAACAGGGAATCTGTAATTGAGGAGATCATTCGTGATGCCCATGATTCCTTGTTACCTGGAATGAGTGAAGCAGCATTTCTTGAAGCTATCTCTCAGGTCATGGATTCCCGCCTTGACAAGCTttcaaaata 1706 0.4279 MSIVDVALRPICKQLAYCQGKVGSCSDESILIYLCVGSTVIPMRVLESDSIASVKVRIQTCKGFVVKKQKLVFGGRELARNDALITEYGVTGGNIIHLVLLLSDLLFIVVRTIRGEEFEFHIDRHRNVGYLKQRIKKKGKGFVDLEDEDQDLFCNGEKLDDQRVFHDICKSNNDVIHLLVKKSAKVRAKPIQNILELSFVATTSDEVQEAKVVGKISSGLDFWLEPFILNPKIKIFPFLWDMMNSTFDGLKKGNHPIRSSEGTGGTYFMQDASGHEYVSVFKPIDEEPMAVNNPQGLPVSSNGEGLKRGTKVGEGAVREVAAYLLDHPRSGPRLISGEAIGFAGVPPTIMVQCLHEKFNHPEGYGCSSKDVKIGSLQTFMDNDGNCEDIGPGAFPVEQVHKITVLDMRMANADRHAGNILFKKEAGGQIVLIPIDHGYCLPDKFEDCTFDWLYWPQASKPYSPDTVDYINSLDAEQDIEILKHYGWDIPHECVRTLRISTMLLKKGVERGLTPYDIGSIMCRENLNRESVIEEIIRDAHDSLLPGMSEAAFLEAISQVMDSRLDKLSK 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02230 568 ProSiteProfiles Ubiquitin domain profile. 106 185 IPR000626 GO:0005515
Bva11g02230 568 Gene3D - 107 194 - -
Bva11g02230 568 SUPERFAMILY Ubiquitin-like 81 182 IPR029071 -
Bva11g02230 568 Pfam Phosphatidylinositol 3- and 4-kinase 262 515 IPR000403 -
Bva11g02230 568 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 567 IPR044571 -
Bva11g02230 568 CDD Ubl_ubiquitin_like 108 179 - -
Bva11g02230 568 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 253 550 IPR000403 -
Bva11g02230 568 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 1 567 - -
Bva11g02230 568 Pfam Ubiquitin family 38 100 IPR000626 GO:0005515
Bva11g02230 568 Pfam Ubiquitin family 108 182 IPR000626 GO:0005515
Bva11g02230 568 ProSiteProfiles Ubiquitin domain profile. 28 100 IPR000626 GO:0005515
Bva11g02230 568 SUPERFAMILY Ubiquitin-like 26 100 IPR029071 -
Bva11g02230 568 SMART ubq_7 106 181 IPR000626 GO:0005515
Bva11g02230 568 SMART ubq_7 30 101 IPR000626 GO:0005515
Bva11g02230 568 SUPERFAMILY Protein kinase-like (PK-like) 408 566 IPR011009 -
Bva11g02230 568 Gene3D - 29 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02230 Bva-Chr11 18048336 18051088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02230 1 567 Acyl Lipid Metabolism Gene Families AT5G24240 56.794 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02230 - - gmx:100809172 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02230 11 18048336 18051088 Bva11g02230 11 18048336 18051088 ECH
Bva11g02230 11 18048336 18051088 Bva02g02048 02 21353568 21356518 ECH
Bva11g02230 11 18048336 18051088 Bva08g01928 08 12943896 12946798 ECH