Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1431 ATGGCCTCTCAATTCCATCCTCACAACCATGCTCTCGAAGAAATGATTAGGAACCTCAAGGTTGATCCTTGTAGTCAACTGGGTGGTCCTCCAAAGGAAGGAAGCCCATCTGATGCAACATCATCTGGAGAAGCAACGGGAAGTGTTAAAGAAAGTGAAGTGGATCAAGAGTCCTTGACAACAGAACCACCACCAGTCATGCCTCCTCACACACCATCATATTATGGATACTACTATCCAGGTTTTGATGGTTCCTTTGCTGAATTGGATGACCAAGGACTGCCTTTGGAGATTCAGTATCCTGTCATGCAAGCAGATAATGGATCTCTCCTTTACTTCACACCAGGATTCCAACCTGGTTACAGCCTCTACAGCCCCGTTGTACCTGTAGCCACGATTGGTGTTGATGGACAGTATGCTGGTCAACACCCATATCCGCCAAGCACTGTGTTTGCACCAGCTATTGCTTCCCCTGGATATATTCCAACCCCTCTCCCCTATGGGTCAGAGTTGTTGCCATCATCTTACTTGTGGGATCCATCTTTTCTAGTTGGAGATGGAGCATATGGAAGTGGTTATATTGGAGTTCCAGATATTGCAGACTCCAAACAAAATTTATCCTCCCCCAGTCATCCTCGTAATCCTCCCTCAAAATCCTTTTCACTTTCTGAGTTCAACAGTCCATTAGAAGTTAAAGGCAGCTCACCATCATCGGTTCATGGCATGCGCAGTCAATTCAAATCAGCAAACAAGGCCTCCCAATATGGTTCACCTTTCCAACCAGATGATGCTCTGGGCAAGGATTACTTTCCGATTGCAAAACTTCAATCCTATAACCAGGGAAAGGGTGGATTACTCTATCCCAACAGCCCTGTTAATCTAAAAGCAAATAGTAGGGGTTGGGTTAGCACAGAAAAGCTGAAAATGAGAAGCAAGGCTAATGCTATTAGTGATTTTGGGGTGCTTGAGCAGAACCATGGTCCCAGAACAGCCAGTGCCAAGGGCGCTTTGGTGTCTGGAGGTAATGATGCTGGATCTCTTTCTGCTGATGGGAATGGAAAGAATAACTGCATAGCCTCGTTGATCAGGAGGGATCAATATAACCTTCCTGACTTTCCGACTAAATATGATCACGCGTTCTTCTTTGTCATCAAATCTTATAGTGAAGATGATATTCATAAAAGCATCAAGTATAATGTGTGGGCTAGTACTCCGAATGGCAATAAGAGGTTGGATGGTGCATATCAGGAAGCAAAGGAAAGGATGGGAGACAGAGGCAGCAAGTGTCCCGTGTTTCTTTTCTTTTCGGTTAATGCAAGTGGGCAGTTCTGTGGAGTAGCTGAGATGATTGGCCGAGTTGATTTTAATAAGAACATGGACTTCTGGCAACAGGATAAGTGGAATGGATTTTTCCCTGTCAAGTGGCACATCATAAAAGATGTTCCAAACCCACAGTTGCGGCATATAATACTTGAGAACAACGACAACAAGCCTGTGACCAATAGCAGAGACACACAGGAGGTGAGATTTCCTCAGGGGATCGAAATCTTGAACATTTTTAAGAACTATGTGTCAAAGACATCTATATTGGACGACTTCGATTTTTATGAAAGCCGCCAAAAGGTGATGCAAGACAAGAAAATCAAGCCATCTATGCCACATTTTGATCATCTACAGCAGAAAGCAGAAGACGTGATCACTGGTTTTCAGGCGGTGGATCTGTCTGCTGTGGAGAAGATTGAAGAACCTCAGGTGGGAGACAAAGCAAACGAATGA 1776 0.4443 MASQFHPHNHALEEMIRNLKVDPCSQLGGPPKEGSPSDATSSGEATGSVKESEVDQESLTTEPPPVMPPHTPSYYGYYYPGFDGSFAELDDQGLPLEIQYPVMQADNGSLLYFTPGFQPGYSLYSPVVPVATIGVDGQYAGQHPYPPSTVFAPAIASPGYIPTPLPYGSELLPSSYLWDPSFLVGDGAYGSGYIGVPDIADSKQNLSSPSHPRNPPSKSFSLSEFNSPLEVKGSSPSSVHGMRSQFKSANKASQYGSPFQPDDALGKDYFPIAKLQSYNQGKGGLLYPNSPVNLKANSRGWVSTEKLKMRSKANAISDFGVLEQNHGPRTASAKGALVSGGNDAGSLSADGNGKNNCIASLIRRDQYNLPDFPTKYDHAFFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAYQEAKERMGDRGSKCPVFLFFSVNASGQFCGVAEMIGRVDFNKNMDFWQQDKWNGFFPVKWHIIKDVPNPQLRHIILENNDNKPVTNSRDTQEVRFPQGIEILNIFKNYVSKTSILDDFDFYESRQKVMQDKKIKPSMPHFDHLQQKAEDVITGFQAVDLSAVEKIEEPQVGDKANE* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1431 591 MobiDBLite consensus disorder prediction 203 257 - -
Vvi19g1431 591 MobiDBLite consensus disorder prediction 35 54 - -
Vvi19g1431 591 MobiDBLite consensus disorder prediction 20 70 - -
Vvi19g1431 591 Gene3D ph1033 like domains 359 535 - -
Vvi19g1431 591 MobiDBLite consensus disorder prediction 203 260 - -
Vvi19g1431 591 CDD YTH 381 520 IPR007275 GO:0003723
Vvi19g1431 591 ProSiteProfiles YTH domain profile. 379 520 IPR007275 GO:0003723
Vvi19g1431 591 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 97 549 IPR045168 -
Vvi19g1431 591 FunFam YTH domain family 1, isoform CRA_a 358 535 - -
Vvi19g1431 591 Pfam YT521-B-like domain 381 521 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1431 Vvi-Chr19 23780796 23784575 Dispersed/Transposed