Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1426 ATGTCCATGCTCTCATCCCTCTTTGAAAACTTGGGGATTGCATCATCTGGGTATGTCCATATGGACTGGAAAGAGACTCCCCAAGCCCACATCTTCCAGGTGGATCTCCCAGGTCTCACAAAGAATGAGGTGAAACTGGAGGTTCATCAAGGGAGGGTGCTCCACATTAGTGGGTGCAGAGAAGAAGAGCCAGAAGAGAAGGGTGAAAAGTGGCACTGCAGAGAGAGGAGCTGTGGCAGTTTCTCCAGGCAGTTCAGGCTTCCAGAAGATGCCAAGGTTGAGGAGATAAAAGCTTCAATGCATGATGGGGTACTCATTGTTACAGTGCCTAAAGATGAGGCTCTGATGAAGCATTCACAGAAAAACATGGTTGAGATTTCTGGGGATGATGAAGCTCATGCTCCTAAAGGACTTGGTCGCTTCGTGTGTTGCAAAGCGTGA 441 0.4853 MSMLSSLFENLGIASSGYVHMDWKETPQAHIFQVDLPGLTKNEVKLEVHQGRVLHISGCREEEPEEKGEKWHCRERSCGSFSRQFRLPEDAKVEEIKASMHDGVLIVTVPKDEALMKHSQKNMVEISGDDEAHAPKGLGRFVCCKA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1426 146 Gene3D - 2 128 IPR008978 -
Vvi19g1426 146 CDD ACD_ScHsp26_like 20 111 - -
Vvi19g1426 146 FunFam 17.5 kDa class I heat shock protein 2 127 - -
Vvi19g1426 146 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 12 127 IPR002068 -
Vvi19g1426 146 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 20 126 IPR031107 -
Vvi19g1426 146 SUPERFAMILY HSP20-like chaperones 12 114 IPR008978 -
Vvi19g1426 146 Pfam Hsp20/alpha crystallin family 22 126 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1426 Vvi-Chr19 23631231 23631671 Transposed