Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1424 ATGGGGAAGAAGGCAGTGTTGATAGGATGCAATTACCAGGGAACCAAGGCTGAGCTCAAGGGCTGCATCAACGATGTCAACCGAATGTACAACTCCCTCGTCAATCGCTTCGGCTTCTCCCAGGACGACATCACCGTCCTCATCGACACCGATCCCGATGGCGTTCAGCCTACCGGCAAGAACATTCGCCGCGCCCTGCTTAATCTCATCCGATCTGCCCAGCCCGGCGACATCCTCTTCGTCCACTACAGCGGCCACGGCACTCGACTCCCTGCCGAGACCGGAGAGGACGACGACACCGGCTACGACGAGTGCATCGTCCCTACTGACATGAATCTTATTACCGATGACGATTTCAGGTCTTTTGTGGACAAGGTTCCGGAGGGTTGCCGCATTACGATAGTGTCGGATTCGTGCCACAGCGGTGGCCTGATCGATGAGGCTAAAGAGCAGATCGGGGAGAGCACCAGGCTGCAACAAGAGCAAGAATCGGGATCTGGATTCGGATTCAAAAGCTTCCTGCACCAAACCGTGCAAGGTGCGATTGAATCTCGCGGAATTCAGCTGCCTTCGGCCTTGCAACACCACCGCCACCACCGCCGCCGCCACCACGAGGAGGATGTGGATGAGGGAGGAGTGGATGCGGAGTACGGAGATCGCGGCTATGTGAAGAGCAGATCTCTGCCGCTTTCAACTCTTATCGAGATACTCAAGCAGAAAACTGGTAAAGATGACATTGATGTCGGGAAACTGAGGCCAACGCTTTTTGATGTTTTCGGTGAAGATGCGAGTCCCAAGGTGAAGAAGTTCATGAATGTTGTTATGAACAAGCTCCAACAAGGCGGCGAGGGTGGAGGCGAGGGCGGAGGGTTCTTGGGAATGGTTGGGAGCCTGGCGCAGGATTTCCTGAAGCAAAAGCTTGAAGAAAACAACGAAGACTACGCGAAACCTGCGTTGGAGACAGAAGTGGGAAGCAAGCAAGAGGTTTATGCAGGGTCCGGGAAGAGGGCACTGCCAGATAATGGGATTCTGATCAGCGGCTGCCAGACTGACCAGACATCCGCGGATGCCAGCCCATCTGGAAACTCTGCTGAAGCTTATGGGGCTCTGAGCAACGCCATTCAAACCATAATTGAAGAATCGGACGGAAGTATTCGGAACCAGGAGCTTGTTTTGAAGGCCAGGGAGACGCTGAAGCGCCAGGGCTTCACTCAGCGCCCTGGACTCTACTGCAGCGATCACCATGCTGATGCTCCATTCATCTGCGACATTTAA 1275 0.5451 MGKKAVLIGCNYQGTKAELKGCINDVNRMYNSLVNRFGFSQDDITVLIDTDPDGVQPTGKNIRRALLNLIRSAQPGDILFVHYSGHGTRLPAETGEDDDTGYDECIVPTDMNLITDDDFRSFVDKVPEGCRITIVSDSCHSGGLIDEAKEQIGESTRLQQEQESGSGFGFKSFLHQTVQGAIESRGIQLPSALQHHRHHRRRHHEEDVDEGGVDAEYGDRGYVKSRSLPLSTLIEILKQKTGKDDIDVGKLRPTLFDVFGEDASPKVKKFMNVVMNKLQQGGEGGGEGGGFLGMVGSLAQDFLKQKLEENNEDYAKPALETEVGSKQEVYAGSGKRALPDNGILISGCQTDQTSADASPSGNSAEAYGALSNAIQTIIEESDGSIRNQELVLKARETLKRQGFTQRPGLYCSDHHADAPFICDI* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1424 424 MobiDBLite consensus disorder prediction 193 213 - -
Vvi19g1424 424 Gene3D - 312 421 - -
Vvi19g1424 424 Gene3D - 1 181 - -
Vvi19g1424 424 SUPERFAMILY Caspase-like 5 119 IPR029030 -
Vvi19g1424 424 FunFam Metacaspase-4 312 420 - -
Vvi19g1424 424 PANTHER METACASPASE-4 3 421 - -
Vvi19g1424 424 Pfam Caspase domain 3 416 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1424 Vvi-Chr19 23626375 23627744 Dispersed