Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1404 ATGGAGAGAAGAGGTGGCAGTATCAGACTCTGCATTTTGGCTCTCTATGTCTCTTTCTTGGTCATTTCTTCATCTCATCACTGTGATGCGAAGAGGGCAATGCGGACACTGAGAGGTTCCAAGCATAGCAGTTTGATCAAGAAGTTGAATGTGAAGCGTTTGGATGGCGATGTGTCGATGTTGGATTCAAGGAAGACGAATACGCAACCTTATGGTGTGAGTTCGCCATTCTCTTTGCCACCCTTTGATTCTCTAGGTCCTATTCCGTTGCCGGATACTGCTCCTCCGTTTTGTATATATCCACCTTCTACTCCACAACCACCTTCTACTATTGTTCCTACCCCTATTGGAATCACACCACCCTTCTATTTTCCACCCGTCGTTCCCATCCAAGGTCCACCTCCAAGCCCAGTTGGTGTCATCCCGGGCTCGCCTGAGTATACTCCGAACCCTAGTCCTCCAGAGGCATTTCCCGGTCCAAACCCTAATCCACCCGTGATCTTTCCCGCTCCGAACCCTAATCCACCTGAGACGGTTCCTAGCCCGAATCCTAATCCACCTCAGATTGTTCCTAGCCCGATCGTTGTCTTTCCTGGGCCCCCGGAATTTACACCCGCTCCACCTTCACCCAACCCACCTTTCTATGAGCCCAGCCCACCCAATTATAGGCCTTCACCTGGTGGTCCTGGCGGATTTGTTCCAAGCCCACCTCATTATGTTCCTACGCCTAGAGGGCCCGGTGGGCCTGGTGGGTTTGTTCCAACCCCACCATTTCAACCGCCGGTGGTGTTTCCTCCGCCTACCGTCCCACCACCTCCACACAAGGGCCCAAACTTCCCCTTGTGGTGCGTCGCGAAGCCAACGGTGCCCGACCCGATCATCGAAGAGGCTATGAACTATGCGTGTGGGTCGGGAGCGGATTGCGCTTCAATTGGGTCCAGTGGGTCATGCTTTCAGCCCGACACACTATTTGCTCATGCCTCGTATGCTTTCAATAGCTATTGGCAAAGGACTAAGGTGGCTGGTGGCACATGCGATTTTGGAGGAACCGCCATGCTAGTCAGCGTTGATCCAAGTTATGATGGGTGCCATTTCATCTATTTATGA 1107 0.5248 MERRGGSIRLCILALYVSFLVISSSHHCDAKRAMRTLRGSKHSSLIKKLNVKRLDGDVSMLDSRKTNTQPYGVSSPFSLPPFDSLGPIPLPDTAPPFCIYPPSTPQPPSTIVPTPIGITPPFYFPPVVPIQGPPPSPVGVIPGSPEYTPNPSPPEAFPGPNPNPPVIFPAPNPNPPETVPSPNPNPPQIVPSPIVVFPGPPEFTPAPPSPNPPFYEPSPPNYRPSPGGPGGFVPSPPHYVPTPRGPGGPGGFVPTPPFQPPVVFPPPTVPPPPHKGPNFPLWCVAKPTVPDPIIEEAMNYACGSGADCASIGSSGSCFQPDTLFAHASYAFNSYWQRTKVAGGTCDFGGTAMLVSVDPSYDGCHFIYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1404 368 SMART X8_cls 281 365 IPR012946 -
Vvi19g1404 368 MobiDBLite consensus disorder prediction 135 259 - -
Vvi19g1404 368 Pfam X8 domain 281 352 IPR012946 -
Vvi19g1404 368 Gene3D - 278 365 - -
Vvi19g1404 368 FunFam Glucan endo-1,3-beta-glucosidase 4 277 367 - -
Vvi19g1404 368 PRINTS Proline rich extensin signature 79 91 - -
Vvi19g1404 368 PRINTS Proline rich extensin signature 118 130 - -
Vvi19g1404 368 PRINTS Proline rich extensin signature 183 200 - -
Vvi19g1404 368 PRINTS Proline rich extensin signature 133 154 - -
Vvi19g1404 368 PRINTS Proline rich extensin signature 158 174 - -
Vvi19g1404 368 PANTHER BETA-1,3 GLUCANASE 280 365 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1404 Vvi-Chr19 23265199 23266484 Transposed