Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi19g1222 ATGGGACAACTCGATTCATTATGGCAGTGGAGGCCTGCTGATGTTGAGAATTGGAAAGTGGCCATGACTCTGAGAGGCCACACTGCTGATGTGGAGGATCTTAATTGGTCTTCTGATAACTCGATATTGGCAAGCGGAAGTTTGGACAACACAATCCATGTCAGGAACATGAGCAATGAATCTGCACCTGATCCACTCCTTTCACCATTTCTCTGCAGTACATCTATTTCAGATGGAAACCAGCAGAATAAATGCTCTAGTGTTAATGCTTCATTTGCTTCTGATATGAAAAGCATTGTGCCATCAACACCTTGCTTGGCATCTATTGGGTTTTCTTTCTTGTAA 345 0.429 MGQLDSLWQWRPADVENWKVAMTLRGHTADVEDLNWSSDNSILASGSLDNTIHVRNMSNESAPDPLLSPFLCSTSISDGNQQNKCSSVNASFASDMKSIVPSTPCLASIGFSFL* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi19g1222 114 PANTHER MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINS 11 59 IPR031120 GO:0005634|GO:0006325|GO:0006351
Vvi19g1222 114 SUPERFAMILY WD40 repeat-like 14 60 IPR036322 GO:0005515
Vvi19g1222 114 ProSiteProfiles Trp-Asp (WD) repeats profile. 24 65 IPR001680 GO:0005515
Vvi19g1222 114 Pfam WD domain, G-beta repeat 22 54 IPR001680 GO:0005515
Vvi19g1222 114 SMART WD40_4 17 56 IPR001680 GO:0005515
Vvi19g1222 114 Gene3D - 2 103 IPR015943 GO:0005515
Vvi19g1222 114 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 24 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi19g1222 Vvi-Chr19 20270044 20270388 Dispersed