Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1795 ATGGCTCAAGATAATGCTGCATGCAACCATGCAAGTGCTGTCACTGGCAACAAAGGTGGTGATACTAACAAAAATGCAGGTGCTGCAAAGAAAGTGGAGGAGGTGCAGCCACATGCTGTGCATGAACAATTGCCTGGAGTTCAATATTGCATCAAGAGTCCTCCTCCATGGCGTGAAGCAGTGCTATTGGGGTTTCAGCATTTCCTTCTGACTCTTGGAGTTACCGTTCTGATTCCAACTATGCTTGTTCCTCAAATGGGTGGAGGAGTTGCTGAGAAGACACGAGTGTTTCAGACACTTTTGTTTGTTTCTGGAATAAGCACATTTCTTCAATCCTTGTTTGGAACTCGACTTCCAATTGTAGTTGTTGGTTCATACACTTACATAGTACCTATAACATCTATTATCCATGCCAGAAGATACAATTCATACACGGATTCTTACGAGAGGTTTATTCAGACAATCAGAGCTATTCAAGGTGCCTTGATCATAACTGCATGTTTCCAGATGGCTGTTGGATTTTTTGGCTTTTGGAGGAACGCTGTCAGGTTTCTCAGTCCACTCAGTGTAGTCCCTTATATAACTTTCACAGGACTCAGCCTCTATCGTTTTGGTTTCCCACTGGTGACAGAATGTGTTGAAATTGGGCTTCCAACATTAGTTGTATTTGTTTTCATATCGCAGTATCTTAATCGTTATATTGGCATGAAAAGGCCTATATGTGACCGATATTCGGTGCTCTTCACTGTTACAATTGCATGGTTATTTGCACTGTTTCTAACTTCATGCACTGTGTATAACAACAAGTCAGAAAGTACACAGAATAATTGCCGCACTGATCGTGCTGGACTTATTACAGCCGCTCCATGGGTGTATTTTCCGGGCTTCTTCCAATGGGGGCCTCCTACATTCAATGCTGGGGAGGCTTTAGCAATGATCGCTGCTTCCTTCGTTTCTTTTTTTGAGTATACCGGTACATGCTATGCTGCAGCAAGATATGGAAGTGCCACACCAGTGCCACCATCTGTTATCAGCCGTGGAGCTGGTTGGGTGGGAGTAAGTGCTATGCTGAGTGGCGTGTTTGGTTCTATAACAGGGTCTACGGCATCAGTAGAAAATGCTGGTTTGTTAGCGTTGACAAAAGCAGGAAGCAGAAGAGTGGTTCAAATATCATCTGCTTTTATGATTTTCTTCTCTATATTCGGAAAATTGGGAGCCTTTTTTGCTTCAGTACCCATGCCAATTATAGCAGCATTATACTGTGTGTTATTCGGCTACGTTTCTTCGGGGGGGCTTGGTTTTCTGCAATTCTGTAACCTGAACAATTTCAGAACGAAATTTGTGTTGGGATTGTCGTTCTTCCTAGGGCTATCCATACCACAATATTTCAGAGAATACTATGAGGTGAAGGAGCACGGTGGAATTCCCTTATGGTTGAATGATGTTGTGAGTGTGATATTGATGTCCCACACAACAGTTGCAGCTTTGGTTGGTTTCGTTTTGGATGTCACACTGTCTCGTGAGGATGATTGTGCACGTAAAGACATCAGTTTACAGTGGTGGGAGAGGTTCAGCTTGTACAGCGCAGATGTTAAGAATGATGAGTTCTACTCTTTACCATGCAGACTTGACAAGCTTTTTCCACCCTCTTAG 1653 0.4319 MAQDNAACNHASAVTGNKGGDTNKNAGAAKKVEEVQPHAVHEQLPGVQYCIKSPPPWREAVLLGFQHFLLTLGVTVLIPTMLVPQMGGGVAEKTRVFQTLLFVSGISTFLQSLFGTRLPIVVVGSYTYIVPITSIIHARRYNSYTDSYERFIQTIRAIQGALIITACFQMAVGFFGFWRNAVRFLSPLSVVPYITFTGLSLYRFGFPLVTECVEIGLPTLVVFVFISQYLNRYIGMKRPICDRYSVLFTVTIAWLFALFLTSCTVYNNKSESTQNNCRTDRAGLITAAPWVYFPGFFQWGPPTFNAGEALAMIAASFVSFFEYTGTCYAAARYGSATPVPPSVISRGAGWVGVSAMLSGVFGSITGSTASVENAGLLALTKAGSRRVVQISSAFMIFFSIFGKLGAFFASVPMPIIAALYCVLFGYVSSGGLGFLQFCNLNNFRTKFVLGLSFFLGLSIPQYFREYYEVKEHGGIPLWLNDVVSVILMSHTTVAALVGFVLDVTLSREDDCARKDISLQWWERFSLYSADVKNDEFYSLPCRLDKLFPPS* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1795 550 MobiDBLite consensus disorder prediction 1 22 - -
Vra6g1795 550 MobiDBLite consensus disorder prediction 1 25 - -
Vra6g1795 550 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 20 549 - -
Vra6g1795 550 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 20 549 - -
Vra6g1795 550 Pfam Permease family 59 464 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1795 Vra-Chr6 34391636 34394885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1795 31 548 Organic Solute Cotransporters AT1G65550 61.059 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1795 - - pvu:PHAVU_001G028700g 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1795 6 34391636 34394885 Vra6g1795 6 34391636 34394885 ECH
Vra5g1442 5 21137082 21141398 Vra6g1795 6 34391636 34394885 PCT