Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1783 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGACAGCAGTTGCGCCTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAACACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCACAGCAAGTGAAGATGAGTGGAGGACTCCAAAAGTGCCTAAAACTGATGACAACATGTCTGCTGCATCCAAAGCAATGCTCTTTCATCAGAGAAACTCTCTGCTGAGATCTAATGTCACCCTTTTCTCTGAGGGCCACAACCAACCACAAATGCTGAGTTTCTCTTCACCAAAATCAGAGCCTTTGATGGTGGACAAGGCCTCCTTAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCGGGAAGCATAAGCATGCATGGGGCTTTGGCTGGTGTGAGAGGGCCATTCACGCCTTCACAGTGGATGGAACTTGAACACCAAGCTTTGATCTACAAGTACATCACAGCAAACGTGCCTGTACCAACTCATCTTCTCATACCCATCAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTTTCAACCGGCCTCCTCAGACCCAACACATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTAGTAGATCAGAAGTATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTACCACCACAACAACCACCACTACTCCTCCTAATGCTTCCTCAAACTCCATTGTGGTGCCCGGCGGCAACAACAACACCTTTGCACACAACAATGTGCACCACCCTCTTCCATCTCATTCCTCTCCAGCCAACACCATCAATAGGATGTTTATGAGTAGCAAAGAGAACAGTAACAACGCTAGTGAGAGGATGCAGGATGGCCCTGCGCTTCCCATGGTGCCTCCAACTCTTGAGCTGAAACCAAAGGACCCTTTCATGATTCATAAACACCAACTCCCATATGATGAATCTTCCTCAAGGAACAACAATGAGTTTGGGCTTGTAACTTCTGATTCCTTGCTCAACCCTTCACAGAAGAGAAGCTTTGGTTCATCATCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATTCTCTCAGGCACTTCATCGATGACTCTCCAAAACCACAGTCTCATCATCACCATCACCATCACCATCACCGTTCTTCTGTTTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCGATCTCCATACCGATATCTTCCTCAGATTTCATGTCATTCACTACCTCCTCACCCTCTAATGAGAAACTCACACTGTCACCACTAAGGCTTTCAAGGGAGTTAGACCCTATTCAAATGGGGTTGGGAGTGGGAAGCGGTGCTCACAATGAGTCAAACACTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGCCCTCTTGGTGAGGTTTTGAACCTGAGTAGTACTAATAACAACAGCAATGGAAGTGATCACTGTGGCAAGAACACTTCTGCCCTCAACCTCATGAAAGATGGGTGGGACAACAGTCCTCCACTAGGGTCATCTCCAAATGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGAGAACAACAACATCAAAGAAGGTGCCAGTGCCACCACACTGTGCAATGCCTTGTGA 1830 0.4803 MDLGVVGLEGLVGSDSSCAFGSSLASDPETKHKWYGSGVLKQERSGTASEDEWRTPKVPKTDDNMSAASKAMLFHQRNSLLRSNVTLFSEGHNQPQMLSFSSPKSEPLMVDKASLNATLPFSYHQLSSYSRNTGYSSGSISMHGALAGVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSAAFCNFSTGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTTTTTPPNASSNSIVVPGGNNNTFAHNNVHHPLPSHSSPANTINRMFMSSKENSNNASERMQDGPALPMVPPTLELKPKDPFMIHKHQLPYDESSSRNNNEFGLVTSDSLLNPSQKRSFGSSSSQKDDSESQQQHSLRHFIDDSPKPQSHHHHHHHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFTTSSPSNEKLTLSPLRLSRELDPIQMGLGVGSGAHNESNTRQANWIPITWESSMGGPLGEVLNLSSTNNNSNGSDHCGKNTSALNLMKDGWDNSPPLGSSPNGVLQKTAFGSLSNSSAGSSPRAENNNIKEGASATTLCNAL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1783 609 Pfam WRC 222 264 IPR014977 -
Vra6g1783 609 PANTHER GROWTH-REGULATING FACTOR 9 26 597 - -
Vra6g1783 609 MobiDBLite consensus disorder prediction 366 441 - -
Vra6g1783 609 PANTHER - 26 597 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vra6g1783 609 MobiDBLite consensus disorder prediction 408 425 - -
Vra6g1783 609 MobiDBLite consensus disorder prediction 45 59 - -
Vra6g1783 609 MobiDBLite consensus disorder prediction 528 548 - -
Vra6g1783 609 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra6g1783 609 MobiDBLite consensus disorder prediction 251 354 - -
Vra6g1783 609 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra6g1783 609 MobiDBLite consensus disorder prediction 553 572 - -
Vra6g1783 609 MobiDBLite consensus disorder prediction 266 338 - -
Vra6g1783 609 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
Vra6g1783 609 MobiDBLite consensus disorder prediction 370 407 - -
Vra6g1783 609 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vra6g1783 609 MobiDBLite consensus disorder prediction 37 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1783 Vra-Chr6 34191096 34195762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1783 41 599 GRF Transcription Factor Family AT2G22840 42.487 4.41e-106 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Vra6g1783 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1783 - - gmx:100818860 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1783 6 34191096 34195762 Vra6g1783 6 34191096 34195762 ECH