Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1774 ATGGACATCAATGCTCTTCTAACTTCTGCTGGAATTAATATTGCTCTGTGTGTGGTGCTCTTTTCATTTTATTCTGTATTAAGAAAACAACCCAGCAATGTTAACGTGTACTTTGGAAGGAGACTAGCCTCTCAGCATTCAAGACGCGTTGATGTCTGCTTGGAAAGATTTGTTCCCTCCCCTAGCTGGATACTGAAATCATGGGAAACGACTGAGGAAGAGATACTAGCTATTGGTGGCTTGGATGCTGTGGTTTTTGTGAGGATGCTTGTGTTCAGTATTCGAGTGTTTTCCATTGCTGCTGTCATCTGCCTTGCTCTAGTGCTTCCTATAAATTACCATGGTAGGGACAGAACGCATAAGTATATACCTTTTGAGTCGCTGGAAGTATTTACCATTGAGAATGTCAAAGAAGGTTCAACGTGGCTTTGGGCTCATTGTCTTGCGCTATACGTCATAACATTCTCGGCCTGCACTCTTCTGTACATTGAATATAAGAGCATTACTAATTTGAGGCTACTGCATATTGTTGGATCACCTCCAAATCCAAGTCATTTCACAATTCTTGTCCGATCAGTTCCCTGGTCTTCTGAAGAATCATACTGTGAAACCGTGAAAAAGTTCTTTTCACATTACCATGCATCAGCATATTTGTCACACCAAATGATTTATAAGTCCGGTAAAGTTCAAAAACTGAAGGATGATGCTGAACATGTGTGTAAAGTACTTAAAAATGCTTCACTGGAAAAGACTTGTAAGCCTAGTTTTAGGCATTGTTGTTCTGGAGCATCAACAAATTCTTTCAAGAAGATTTCTAATGAAATGGACAGTGTTAATGGTGGAACGGACAATACTGACATGAATTTAGAAACAACGAAAAAGGAATGTGCCGCTGCTTTTGTATTCTTTAAAAGTCGGTATGCTGCTCTTATGGCTGCAAAGGTACTGCAGACACCAAATCCTATGTTATGGGTGACAGATGTAGCTCCTGAACCGCATGATATTTATTGGTCCAATATTTGCGTACCATATAGGCAACTTTGGATCCGTAAGATAGCTACACTTGTGGCCTCTATTGCCTTCATGCTCGTGTTCCTTATCCCTGTTACATTTGTACAAGGATTGACTCAACTAGACAAACTTCAGAAAATGTTCCCTTTTCTGAGAGGGATATTTAAAGAGAAAATTGTGAATCAGGTGGTGACTGGTTACCTACCAAGCGTGATATTGGTTTTATTTTTCTGCGCAGTTCCACCTATGATGATGCTATTTTCTTCTGTGGAGGGTTCTATTTCTCGTAGTGAAAGGAAGAAGAGTGCATGTTGTAAAGTCTTGTACTTCACAATTTGGAACGTGTTTTTTGTTAATGTATTTACTGGTTCTGTTATCACTCAGCTCTCAGTTTTTACTAGCGTAACAGACCTGCCTGCCCAACTTGCCAAGGCAGTGCCATCGCAGGCTACTTTCTTCACAACTTACGTTTTATCGTCTGGTTGGGCGAGCTTGGCATGTGAAGTTATACAAATTTTCCCTCTTCTATGCAATATTTTCCAGAGATTCATACTCAGACTTAAGGAAGATGCACTGGATAGCAGCCTATCTTTTCCGTACCATACAGAAGTTCCAAGAGTATTATTGTTTGGATTCCTCGGCTTCACTTGTTCTATTCTGGCACCCCTGATGTTGCCCTTCTTGTTGTTCTACTTTTTCCTTGCTTACCTTGTTTACCGAAACCAGATTATCAACGTGTACATTACAAAATATGATAGTGGGGGACAGTTCTGGCCTATAGCTCACAACACCACCGTGTTTTCATTGATATTTTCTCAACTTATCGCGCTGGGGGTGTTTGGACTTAAACGCTCATCAGTTGCATCTGGATTCACCATTCCATTGTTGATTGGTACGCTTCTATTTCACCAGTATTGTAGGCAACGGTTTCTCCCGATATTCAAGAGCAATTCAGCACAGATTGTAATTGACATGGATATGAGAGATGAGCACAGCGGGAGGATGGAAGAGATTTATGAGCATTTACCTGTAGCCTACAACCAGCCCAGTTTAACGGAAGAAGATGCCTCAAGCCAACCCCAATGCGACAAACGTCACGAGGACATGGACAGAGGTCAATCTTCATCAGAAGATATGGAAAAAGGCAAGGAACTTTTTAAAAAACATAGACCACGCCCAGTACAACGCTCAGTGAGTTTGAACTCGGATAAATCTGTACTTGATTTAAACCTATGA 2247 0.409 MDINALLTSAGINIALCVVLFSFYSVLRKQPSNVNVYFGRRLASQHSRRVDVCLERFVPSPSWILKSWETTEEEILAIGGLDAVVFVRMLVFSIRVFSIAAVICLALVLPINYHGRDRTHKYIPFESLEVFTIENVKEGSTWLWAHCLALYVITFSACTLLYIEYKSITNLRLLHIVGSPPNPSHFTILVRSVPWSSEESYCETVKKFFSHYHASAYLSHQMIYKSGKVQKLKDDAEHVCKVLKNASLEKTCKPSFRHCCSGASTNSFKKISNEMDSVNGGTDNTDMNLETTKKECAAAFVFFKSRYAALMAAKVLQTPNPMLWVTDVAPEPHDIYWSNICVPYRQLWIRKIATLVASIAFMLVFLIPVTFVQGLTQLDKLQKMFPFLRGIFKEKIVNQVVTGYLPSVILVLFFCAVPPMMMLFSSVEGSISRSERKKSACCKVLYFTIWNVFFVNVFTGSVITQLSVFTSVTDLPAQLAKAVPSQATFFTTYVLSSGWASLACEVIQIFPLLCNIFQRFILRLKEDALDSSLSFPYHTEVPRVLLFGFLGFTCSILAPLMLPFLLFYFFLAYLVYRNQIINVYITKYDSGGQFWPIAHNTTVFSLIFSQLIALGVFGLKRSSVASGFTIPLLIGTLLFHQYCRQRFLPIFKSNSAQIVIDMDMRDEHSGRMEEIYEHLPVAYNQPSLTEEDASSQPQCDKRHEDMDRGQSSSEDMEKGKELFKKHRPRPVQRSVSLNSDKSVLDLNL* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1774 748 Pfam Cytosolic domain of 10TM putative phosphate transporter 185 339 IPR027815 -
Vra6g1774 748 MobiDBLite consensus disorder prediction 732 748 - -
Vra6g1774 748 Pfam Late exocytosis, associated with Golgi transport 6 164 IPR032880 -
Vra6g1774 748 MobiDBLite consensus disorder prediction 688 748 - -
Vra6g1774 748 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 733 - -
Vra6g1774 748 MobiDBLite consensus disorder prediction 695 724 - -
Vra6g1774 748 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 733 IPR045122 GO:0005227
Vra6g1774 748 Pfam Calcium-dependent channel, 7TM region, putative phosphate 350 617 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1774 Vra-Chr6 34024044 34033718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1774 K21989 - gmx:100796574 1254.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1774 6 34024044 34033718 Vra6g1774 6 34024044 34033718 ECH
Vra6g1774 6 34024044 34033718 Vra5g1422 5 20924325 20941910 PCT