Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1765 ATGGATTTCATGAAGGTCTTCGATCAAACCGTTCGAGAAATAAAGAGAGAGGTAAATCTGAAGGTGCTTAAGGTTCCGGAAATCGAACAGAAGGTGCTCGATGCAACTGATAATGAACCTTGGGGTCCTCATGGTACTGCACTGGCAGAGATTGCGCAGGCTACCAAAAAATTTACTGAATGTCAAATGGTCATGAATGTCCTTTGGACAAGATTGGGCGAAACTGGAAAAGACTGGAGATATGTATACAAGGCGTTGGCGGTTATAGAGTATTTGGTAGGAAATGGATCTGAACGTGCAGTCGACGACATTATAGAACATACTTTTCAGATTTCAGCACTTTCTAGTTTTGAATATGTTGAGCCAAGTGGGAAGGACGTAGGACTCAATGTAAGGAAGAAGGCTGAAAACATTGTGTCCCTTTTGAATGATAGGGATAAGATACATGATGTCAGAAATAAAGCTGCTGCAAACCGTGACAAGTACATTGGAGTTTCTTCTAGTGGTATTACATACAAGTCTGGTGGGTCAGCCTCTTATAGTAGTGGCGGCATCTCTCAGAGCAGTGGTAAGTATGGAGGCTTTGGATCTAGAGATGGTGACAGGTTTAGTGATAGCAATAGAGACAAGGGGGGATCCTATGATGAAGATTACCATGGAAAATCACACCATACTGTTGCAAGTGACAATCAAGACAACTCCTTCAAGAAGGGTTCATCACGATCTGTCAGCAAAAGTCCGGAAAACAAGTCATCTAGAGTATCAAAGTCATCAACTAATGCAAATAATTATGGTTCAGTTCCTTCTCAAAGTTCAAGTGTACCTGAAAATAGTACTGAGGATGACATGGATGATTTTGATCCAAGAGGAACTTCTACCAAAAGTTCGGCAGGAAACTCTAACCAAGTTGATCTCTTTGGACAAGATTTAATTGGTGACTTCATGGATGCTCCGACATCTGTTCCTGTAGAGAAGCCAACAACTGGTAATTTGCCAGAGGTTGATCTTTTTGCAGATGCGTCATTTGTATCTGCAACACCTCAAATGGACAAAGGAGCCAGTTCTCAACCACAGGCTGAGGTGGATCTATTTGCTTCACAACCCCCTATTTCTACAGTTACACCGACAGTTGACTTGTTTTCCATTCCTGAACCGGTAGTGCAGCCAGATAGCAAGCCAGAGAAATCTGGTCCTGTGGATAACAGCTCGTTTGATCCATTTGCTGCTGTTCCTCTTAATAATTTTGATGGATCTGATATTTTTGGTGATTTTACTTCTCAATCTGATTCGTTGTCTTCCCAGCCCTCCAATAATGTTGTCAGTGATGACAAACATGATAATATCGCTGGCAAATCTTTAGCAGACTCTAAAGTTCCAGCTAAAAAGGATACTTTCCAGGTGAAGTCTGGTGTCTGGGCTGATTCACTAAGCCGCGGACTGATCGATCTCAATATAACTGCCCCTAAAAAAGTATCCCTTGCGGATGTTGGGATTGTGGGTGACTTGAGCGATGGATTTGACGGAAAGGAGAAAGGCCCTCCACCGTCATTTTACATGGGGAGAGCTATGGGTTCAGGTTCAGGAAGTCTTGGAATCGGTAGGTCTGGCTTCACTCCTTCACAACCAGCACCTGGAGACGACATATTCTCAAACCTTGGCTCCCAACAATATCAATTCGGTGGGTTCCAGAAGTAA 1695 0.4301 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGTALAEIAQATKKFTECQMVMNVLWTRLGETGKDWRYVYKALAVIEYLVGNGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKAENIVSLLNDRDKIHDVRNKAAANRDKYIGVSSSGITYKSGGSASYSSGGISQSSGKYGGFGSRDGDRFSDSNRDKGGSYDEDYHGKSHHTVASDNQDNSFKKGSSRSVSKSPENKSSRVSKSSTNANNYGSVPSQSSSVPENSTEDDMDDFDPRGTSTKSSAGNSNQVDLFGQDLIGDFMDAPTSVPVEKPTTGNLPEVDLFADASFVSATPQMDKGASSQPQAEVDLFASQPPISTVTPTVDLFSIPEPVVQPDSKPEKSGPVDNSSFDPFAAVPLNNFDGSDIFGDFTSQSDSLSSQPSNNVVSDDKHDNIAGKSLADSKVPAKKDTFQVKSGVWADSLSRGLIDLNITAPKKVSLADVGIVGDLSDGFDGKEKGPPPSFYMGRAMGSGSGSLGIGRSGFTPSQPAPGDDIFSNLGSQQYQFGGFQK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1765 564 MobiDBLite consensus disorder prediction 426 447 - -
Vra6g1765 564 PANTHER EPSIN/ENT-RELATED 1 555 - -
Vra6g1765 564 SUPERFAMILY ENTH/VHS domain 7 152 IPR008942 -
Vra6g1765 564 SMART enth_2 26 152 IPR013809 -
Vra6g1765 564 MobiDBLite consensus disorder prediction 529 550 - -
Vra6g1765 564 MobiDBLite consensus disorder prediction 201 226 - -
Vra6g1765 564 Gene3D - 19 165 IPR008942 -
Vra6g1765 564 Pfam ENTH domain 27 147 IPR013809 -
Vra6g1765 564 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Vra6g1765 564 MobiDBLite consensus disorder prediction 174 303 - -
Vra6g1765 564 MobiDBLite consensus disorder prediction 426 443 - -
Vra6g1765 564 PANTHER CLATHRIN INTERACTOR EPSIN 1 1 555 IPR033521 GO:0006623|GO:0030276
Vra6g1765 564 CDD ENTH 28 144 - -
Vra6g1765 564 MobiDBLite consensus disorder prediction 174 193 - -
Vra6g1765 564 MobiDBLite consensus disorder prediction 227 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1765 Vra-Chr6 33855605 33863667 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1765 K12471 - gmx:100809198 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1765 6 33855605 33863667 Vra6g1765 6 33855605 33863667 ECH