Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1760 ATGTTCATTCTCTTATGGCTGCTAACCACAGTCCATGGTGGCTCTCTATCAAGACTCAAGATTTTGGAAGTTGAGAGAAAATTAAAGTATCTCAGAAGACATTCCTTAAAAACTATCAAGAGTGAAGATGGAGATGTAATTGATTGCATTGCCATTAATAAACAACCAGCATTTGATCATCCAGCATTGAAGAATCACAAAATTCAGATGGCTCCTACTCACCTAACAGCTGGATCAAGAACTTCAAGAAATGGAAAAAATGCAAATGAATCTTTGAGTGTGACTTCACAAGTGTGGCAGAAAAGTGGAAAATGTGGAAAGGGAACAATACCAGTTAGAAGAATAAGAAAAAGAGAGCTATTGAAGGCTCATTCAATTGAAGAATATGGAAGGAAGAAGCCAAGCTTCTCTCACCATCAACATGCTGAACTGAATAAGAATCTTGATTCCTTTGTTCAACTTAAAAACCACTCTAAGGCAATATTGTTTACAGTTGGTTACCGTTATTTGGGAGGAAAAGCAGATCTGAGAGTGTGCAACCCTTTTGTTGAAAAGGATGATGAATACAGCATTACTCAAGTCGCTCTCTTAACAGGCCCATACAATGACTTTGAGTCTGTTCAATCTGGTTGGGCAGTGAATCCTAGTGTATATGGAGATAGACAAACTCGATTATTTGTATACTGGACGGCTGATGGTTCAAAGAAAAGTGGTTGTTTTGATCTAACCTGTCCTGGGTTTATTCAGACAAGCAATGAGATTGCCTTGGGTGCTGCTATACATCCAATCTCAATTCCTGCTGACCTTCCATACGTAATAACAATTTACATCTTTAAGGATCCCTATACCAACAATTGGTGGGTGCAATATGGTGAGAAGACCTACATAGGTTATTGGCCACCGGAGTTGTTTAAAACAATACTTTACAATGCACAATCTGTGGAGTGGGGTGGTGAAGTTTACAGTACAAGCATTGGACAAACTCCTCACACAGCAACACAAATGGGCAACGGCCAATTTGCTTCAGTTTTGGAGTTTTCATCTGCAATAACAAGAATGAGAATTCATGACAACTCTGAATTCTTGAAAATCCCAGAATTGGTTTATGATTATTCTGATGAATATAATTGCTATGATGTTTGGTACATGTCAGATTACATTGATGATCCTCAATTCTATTATGGGGGTCCTGGTAGAAATCCAAAGTGCCCTTAA 1215 0.3835 MFILLWLLTTVHGGSLSRLKILEVERKLKYLRRHSLKTIKSEDGDVIDCIAINKQPAFDHPALKNHKIQMAPTHLTAGSRTSRNGKNANESLSVTSQVWQKSGKCGKGTIPVRRIRKRELLKAHSIEEYGRKKPSFSHHQHAELNKNLDSFVQLKNHSKAILFTVGYRYLGGKADLRVCNPFVEKDDEYSITQVALLTGPYNDFESVQSGWAVNPSVYGDRQTRLFVYWTADGSKKSGCFDLTCPGFIQTSNEIALGAAIHPISIPADLPYVITIYIFKDPYTNNWWVQYGEKTYIGYWPPELFKTILYNAQSVEWGGEVYSTSIGQTPHTATQMGNGQFASVLEFSSAITRMRIHDNSEFLKIPELVYDYSDEYNCYDVWYMSDYIDDPQFYYGGPGRNPKCP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1760 404 Gene3D - 181 290 - -
Vra6g1760 404 Pfam Neprosin activation peptide 38 143 IPR025521 -
Vra6g1760 404 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 32 402 - -
Vra6g1760 404 PANTHER CARBOXYL-TERMINAL PEPTIDASE 32 402 - -
Vra6g1760 404 Pfam Neprosin 187 397 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1760 Vra-Chr6 33804922 33808239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1760 - - gmx:100816380 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1760 6 33804922 33808239 Vra6g1760 6 33804922 33808239 ECH
Vra6g1760 6 33804922 33808239 Vra5g1411 5 20824704 20829905 PCT