Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1758 ATGCAATCTAGGGGTGTGGCACTTGAAGAGGGAAAGGAAAGAAGCAGCCAATCGAAGCCTTTGAGACCACTGCGGCTACTTGTGTTGTTTTTTGCTCTCTGTGTTGTGTTTTCGGTCATTAGCATATACACGGTTAAGCATTTTGGAATTGAGAGTATGGTGACTACAATGAGTTCTAATTTTCAGCCATGTTATTATGAGGAGCCTGGTGGTTTGGATAAGTGGATTAGGCCACCTTTGAGCCTGATCCACAATATGAGTGACAAAGAACTGCTGTGGAGGGCTTCTTTTGTTCCAAGGATCAAGGATTATCCATATCCTAGAATTCCCAAGATTGCATTCATGTTCCTGACCAAGGGACCATTGCCTCTGGCACCCCTTTGGGAGAGGTTTTTCAAGGGTCATGAGAAGTTGTTTTCCATATATATTCATTCACTGCCCTCATATCAACCTCAGTTTCCTCCTTCTTCTGTCTTTTACGGCAGGCAAATCCCTAGCCAGGTTTCTGAGTGGGGAAGGATGAGCATGTGTGATGCTGAAAGAAGACTCCTTGCTAATGCATTGCTTGACATCTCCAACGAGTGGTTCATACTTCTCTCTGAGTCATGCATTCCCCTTTACAAATTCAGTTTTGTCTACCATTACATAATGAAATCCAAACACAGCTTCATGGGTGCATTTGATGATCGGGGTCCATTTGGAAGAGGGCGCTACAACGAGAACATGGCCCCTCTGGTGAACATCACCAAGTGGCGCAAGGGCTCGCAATGGTTTGAAGTAAACCGAAAGGTCGCCATCACCATAGTTGAAGACACCAAGTTCCATCCGATATTCGAGCGATATTGCCGGCCGGCTTGCTATGTCGACGAGCATTACTTCCCGACGATGCTCACCATTCAAGCAGCAAATGTTTTGGCCAACAGAAGCATAACTTGGGTGGACTGGTCTAGGGGTGGAGCTCACCCAGCAACATTTGGAAGAAATGACATCACTGAGGAGTTTTTCAACAGAGTACGAGGAGGTCATACATGTTTGTACAACAATAGAAACTCTTCTGTTTGTGTGCTTTTCGCCAGAAAATTTGCTCCCAGTGCTTTGGAACCTTTGTTACAGATGGTTGATTCAAAGGTATTGGAGTATTGA 1143 0.4506 MQSRGVALEEGKERSSQSKPLRPLRLLVLFFALCVVFSVISIYTVKHFGIESMVTTMSSNFQPCYYEEPGGLDKWIRPPLSLIHNMSDKELLWRASFVPRIKDYPYPRIPKIAFMFLTKGPLPLAPLWERFFKGHEKLFSIYIHSLPSYQPQFPPSSVFYGRQIPSQVSEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSFVYHYIMKSKHSFMGAFDDRGPFGRGRYNENMAPLVNITKWRKGSQWFEVNRKVAITIVEDTKFHPIFERYCRPACYVDEHYFPTMLTIQAANVLANRSITWVDWSRGGAHPATFGRNDITEEFFNRVRGGHTCLYNNRNSSVCVLFARKFAPSALEPLLQMVDSKVLEY* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1758 380 Pfam Core-2/I-Branching enzyme 112 338 IPR003406 GO:0016020|GO:0016757
Vra6g1758 380 PANTHER - 8 373 - -
Vra6g1758 380 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 8 373 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1758 Vra-Chr6 33794451 33798617 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1758 - - gmx:100819890 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1758 6 33794451 33798617 Vra6g1758 6 33794451 33798617 ECH