Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1756 ATGAAGATTGTTTCAGTTGCAGTTAGGTCACTAAGTGTCAATTTGTCCCATCAGTTTTATCAGACTCATATGTTCAGAAGCCTTTCCACTTGGGGATTTACAGATAATCAAACCAGTGATCAGCAGGCTAACAAGTCAGAACCTCCTGAGGAGTTTGGGATGTTTGGAGAAAATCGTGGTAGATTTCCCCAATTTGATTCCATTCTTGAAAAGATTAGCCAACAGGGAAGGGCTCGACATAGATCTGGTTTTGGAAATGGTGCTGGTTTTCATATGATGGATTATCTAGAAGAAAATGATGACTCGTTATCTGATGGAATGGATGAAAACCTGAAGAATGCTGCCACATGCTTTGAAGTTGATGAGGATGAAATTGAGAAAGAAGATTATGCTTTTCGATACGATACCGATTTCATACCTGGTTCAACATATGATATAAAGGATCTGGATCTTACCAAACCTGGTGTACGCAAGCCTCCCATGAGGGATGAATTCCGTGTAACCACCAAAGAAGTTCTCAGTCAAGCAGATTTCAGGAATGTAAGATTCCTGGCAAATTTCATAACAGAGGCAGGAATTATAATCAAGCGAAGCAAGACCGGCATCAGTGCAAAGGCTCAAAGAAAGGTTGCCAGGGAGATAAAAACTGCTCGAGCATTTGGCTTGATGCCCTTTACAACAATGGGAACGAAGTCATTTATTTTTGGAAGAACTATGGAGAATCTTGATGAAGACTTTTCATACGAAATTAGGAAGCAGGACATGGATGAGGAACCTGATTTGGATGGAGGTCAAGCTTAG 801 0.407 MKIVSVAVRSLSVNLSHQFYQTHMFRSLSTWGFTDNQTSDQQANKSEPPEEFGMFGENRGRFPQFDSILEKISQQGRARHRSGFGNGAGFHMMDYLEENDDSLSDGMDENLKNAATCFEVDEDEIEKEDYAFRYDTDFIPGSTYDIKDLDLTKPGVRKPPMRDEFRVTTKEVLSQADFRNVRFLANFITEAGIIIKRSKTGISAKAQRKVAREIKTARAFGLMPFTTMGTKSFIFGRTMENLDEDFSYEIRKQDMDEEPDLDGGQA* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1756 266 Pfam Ribosomal protein S18 176 223 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 TIGRFAM S18: ribosomal protein bS18 169 226 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 PRINTS Ribosomal protein S18 family signature 183 193 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 PRINTS Ribosomal protein S18 family signature 201 215 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 PRINTS Ribosomal protein S18 family signature 215 225 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 PANTHER 30S RIBOSOMAL PROTEIN S18 21 258 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 SUPERFAMILY Ribosomal protein S18 155 226 IPR036870 -
Vra6g1756 266 Hamap 30S ribosomal protein S18 [rpsR]. 153 228 IPR001648 GO:0003735|GO:0005840|GO:0006412
Vra6g1756 266 Gene3D Ribosomal protein S18 165 228 IPR036870 -
Vra6g1756 266 PANTHER 28S RIBOSOMAL PROTEIN S18C, MITOCHONDRIAL 21 258 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1756 - - vun:114194755 442.965