Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1755 ATGGCCACCACCACCACTTCTCTTTCCACGCTCTTCCTTCTCTTCCTCGCAACCGTCGCTCTTGTTGCCGCTCGCCGTGACCTCGTCGGAGACTTCCTCCGGCTGCCGTCTGATTCCGGTAACGATGATAACGTCAAGGGGACGCGCTGGGCCATCCTCTTCGCCGGTTCGAACGGCTATTGGAACTACAGACATCAGGCCGATATTTGTCATGCCTATCAAATACTGAGGAAAGGTGGCCTGAAAGAAGAAAATATCATTGTTTTTATGTATGATGACATTGCATTCAATTGGGACAATCCAAGGCCTGGAGTCATCATTAACAAACCAGACGGGGATGATGTTTATGAAGGAGTTCCAAAGGATTACACTGGCGAAGATGCTACTGCTCATAACTTTTATTCTGCTTTACTTGGAGATAAGTCGGCGCTTACCGGTGGCAGTGGGAAGGTTGTGAACAGTGGGCCCGATGATCGCATATTTATATTCTACTCTGATCATGGTGGTCCAGGGGTTCTCGGGACGCCTGCTGGTCCTTACATATATGCATCTGATTTGGTTGAAGTATTGAAGAAAAAGCACGCTTCTGGAACGTATAAAAACCTAGTATTTTATTTGGAGGCATGTGAAGCTGGAAGTATTTTTGAAGGTCTTCTTCCTGAAGATATCAATATTTATGCAACAACGGCTTCGAATGCCGAAGAAAGTAGTTGGGGAACATATTGTCCTGGGGAATATCCTAGTCCTCCCCCAGAATATTCAACCTGCTTGGGTGACCTGTACAGTGTTGCTTGGATGGAAGACAGTGATAGACACAATTTGCGAACAGAATCTTTACACCAACAATATAAAGTGGTTAAGGATAGGACTCTATCTGGAGGTTGGTATGGCTCTCACGTGATGCAGTATGGTGATGTAGAGTTTAGCAAGGATACTCTCTTCCTGTATTTGGGTACAGATCCTGCAAATGATAATTTGACTTTTGTGGATGAAAACTCCTTATGGTCATCTTCAACAGCAGTCAACCAAAGGGATGCTGATCTCGTCCATTTTTGGCATAAGTTCCGCAAAGCTCCGGAGGGTTCTCCTAAGAAAAATGAAGCTCGGAAACAAGTTCTGGAAGTAATGTCTCACAGAATGCATATAGACGACAGTGTGAAACTTGTTGGAAAGCTTTTATTTGGATTTGAAAAGGCTCCTGAAGTACTGAATGCTGTTAGACCGGCTGGATCGGCACTTGTTGATGACTGGGCCTGCCTGAAAACCATGGTAAGGACTTTTGAGACACATTGCGGATCCTTGTCTCAGTATGGGATGAAACACATGAGGTCCTTTGCAAACATCTGCAATGTAGGAATAAAGAAAGAGCAAATGGCTGAAGCCTCAGCACAAGCTTGTGTCACTGTTCCTGCCAGTTCCTGGAGTTCTCTGCAAAGAGGTTTCAGTGCATAA 1452 0.4511 MATTTTSLSTLFLLFLATVALVAARRDLVGDFLRLPSDSGNDDNVKGTRWAILFAGSNGYWNYRHQADICHAYQILRKGGLKEENIIVFMYDDIAFNWDNPRPGVIINKPDGDDVYEGVPKDYTGEDATAHNFYSALLGDKSALTGGSGKVVNSGPDDRIFIFYSDHGGPGVLGTPAGPYIYASDLVEVLKKKHASGTYKNLVFYLEACEAGSIFEGLLPEDINIYATTASNAEESSWGTYCPGEYPSPPPEYSTCLGDLYSVAWMEDSDRHNLRTESLHQQYKVVKDRTLSGGWYGSHVMQYGDVEFSKDTLFLYLGTDPANDNLTFVDENSLWSSSTAVNQRDADLVHFWHKFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVKLVGKLLFGFEKAPEVLNAVRPAGSALVDDWACLKTMVRTFETHCGSLSQYGMKHMRSFANICNVGIKKEQMAEASAQACVTVPASSWSSLQRGFSA* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1755 483 PIRSF AE 3 483 IPR043577 GO:0004197|GO:0051603
Vra6g1755 483 PANTHER HEMOGLOBINASE FAMILY MEMBER 6 482 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PRINTS Hemoglobinase (C13) cysteine protease signature 50 74 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PRINTS Hemoglobinase (C13) cysteine protease signature 75 104 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PRINTS Hemoglobinase (C13) cysteine protease signature 122 137 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PRINTS Hemoglobinase (C13) cysteine protease signature 150 169 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PRINTS Hemoglobinase (C13) cysteine protease signature 199 215 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 PIRSF Legumain 3 483 IPR001096 GO:0006508|GO:0008233
Vra6g1755 483 Gene3D - 47 342 - -
Vra6g1755 483 PANTHER VACUOLAR-PROCESSING ENZYME 6 482 - -
Vra6g1755 483 Gene3D - 343 472 IPR046427 -
Vra6g1755 483 Pfam Peptidase C13 family 49 318 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1755 Vra-Chr6 33756290 33762253 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g1755 K01369 - gmx:547700 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1755 6 33756290 33762253 Vra6g1755 6 33756290 33762253 ECH
Vra6g1755 6 33756290 33762253 Vra5g1408 5 20795749 20801664 PCT