Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2349 ATGGTGGATATGGATGGGTTTGGAGCTGGGGGTGGCGTTGATGGTGCTCCCAACACAGAGAATCTTAGAGAATTGGGGAATGTTACCTCAGAAGGTGCAGTTTTTGATGCATCGCAATATGCATTCTTCGGGAAAGAAGTCGAGTTGGGAGGGTTAGAAGATGATGACCGTTTGCCTACTCTTGATTCTAATGAAGAGGAGTTCTTTTTCAATAGAGAAGATGCCGATGATGTGAGATCTCTTTCTGATATTGATGATCTTACTACCACTTTTTTGAAGTTGAACAAGTTCGTCAGTGGACCAAGAAGCGCAGGAGTTATTGGTGAACGCGGATCAAGAGAAAATTCAACATCTGAATGGTCACAAAGGGAAGATAGTATTAACTGGTTTGATCAGAATCCTTATGATAGTGAAGGTTCTACAGATAGCAAAAGATGGTCATCACAGCCCCATTCTTCCCTAGCCCATTTACATGATTCAAAGCCCTTGTACAGAACATCATCATATCCCGAGCAGCAAAGGCAGGAACAACACTACCACCTCCAACATTGCTCTAGTGAACCAGTTCCAAACTGGCTTGATCAGCACATTTATGATTCAGAAACTGCTCATGATCATGATGGCAAACGATGGTCATCACAGCCACATTCCTCCATTCCACATTTACCAGAATCAAAGCCTTTGTACAGAACATCTTCATATCCTGACAAGCAACAGGAGCTTCCTCGTTTTTCTAGTGAACCAATTTTGGTACCAAAGTCTTCTTTTACTTCTTATCCTCCCCCCGGTGGTCTATCCCAGCACGCTTCTCCCAGCCATAGTACAGGACACTTAAACAGTCCTTATCATAGTGCAGCAGCTCAGATGGCTTTATCATCTCAGAATCGTTCTCATTTCTCCAATTCTGCACTGCAGTCGGGTGCTTTAAATCTTGGGTCACATTTTGGTGGAAACACACGCCAATTTCCTACTGGTTCCCATCTTAATCAGCGATTACAGAATCAATTGGTCAACCAGGCAGGGTTGTACCCTGGAGATCACTCAAGTCTCCTTAATAATATGTTACAACAACAATTTCACCTTCATAATGGATCAGTATCTCCTCACTTGATGACTCAATTACAACAACAGCAGCATAGACTGCGTCATCCTGTGCAGCGTTCTGCTGGCTACTTATCAGGCTACCAGTCTCATCTATTCAATGCCCACCTTTCCTCTGGCTCATCTGCAATTAACAAATATGACCATGTGCTTGGTCTTGCTGATGGTAGAGATCATAGGCCAAAATCAACTCATAAAGGTAAACACGGTCTTCGACATTCCCAACATGGTTCTGATGCCATTCAAAAGAGTGATAGTGGTTCATTTCAGTTCCGGTCCAAGTATATGACAAGTGATGAAATTGAAAGCATTCTTAGAATGCAACATGCTGTGACACATAGTAATGACCCGTATGTAGATGACTACTACCACCAAGCTTGTCTAGCAAAAAAGTCTTCTGTGGCCAAGTTAAAACATCCATTTTGCCCAACCCAGATAAGGGAAATTCCTCCACGAACCCGTGCTAATGCTGAACCACATGCATTTGTGCAGGTTGATGCCCTAGGGAGAGTTTCATTTTCATCTATTCGTCGGCCTCGCCCTCTTCTTGAGGTTGATCCTCCAAACACTTCCATAAGCTCTGATCAAAATATTTCAGAGAAGCCTCTTGAGCAGGAACCTAGGTTTGCTGCCAGAGTTGCAATTGAGGATGGTCTTTGCCTTCTTCTGGATGTGGATGATATTGATCGTTACCTACAGTACAATCAGCTACAGGATGGTGGAACACAATTAAGACGAAGAAGGCAAGTCCTGTTAGAAGGACTTGCAACTTCACTTCAACTTGTTGACCCACTGGGAAAGAATGGACACAAAGTTGGACTTGCTGCCAAGGATGACCTTGTTTTCTTACGGTTGGTATCTCTTCCCAAGGGACGCAAGCTCCTTGCAAAGTATCTTAAGTTGCTTCCTCCTGGCAGTGAGCTTACGAGGATAGTCTGCATGACAGTCTTTCGTCATTTGAGATTCTTATTTGGTGGTCTTCCCTCAGATCTGTCAGCTTCAGAGACTACAAATAATCTGGCCAAGGTGGTTTGCCAATGTGTACGAGGAATGGATCTTGGTGCTCTTAGTGCCTGTCTTGCTGCAGTTGTTTGTTCTGCAGAGCAGCCTCCTCTACGTCCCATTGGAAGCACCTCTGGAGATGGTGCTTCCCTTATTTTAATAGCTGTTCTTGAGAGGGCTACTGAACTTCTGACTGATCCACATGCTGCCTGCAACTACAACATGGGTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTCTTTGGCCTTCTCACCAAGTATTGCATGAATAAATATCATAGTATCATGCAATCCATGCTCATACAAAGTACCTCGAATATGGATGATGTCGGACCAGATGCTGCCAAAGCTATTAGTAGAGAAATGCCTGTTGAACTCTTGCGTGCTAGTCTTCCTCACACCGATGAGCGTCAGAGGAAGTTATTACTAGATTTTGCTCAACACTCCATTCCTGTGGTTGGATTTAACAGCAACACTGGGGGTTAA 2613 0.4382 MVDMDGFGAGGGVDGAPNTENLRELGNVTSEGAVFDASQYAFFGKEVELGGLEDDDRLPTLDSNEEEFFFNREDADDVRSLSDIDDLTTTFLKLNKFVSGPRSAGVIGERGSRENSTSEWSQREDSINWFDQNPYDSEGSTDSKRWSSQPHSSLAHLHDSKPLYRTSSYPEQQRQEQHYHLQHCSSEPVPNWLDQHIYDSETAHDHDGKRWSSQPHSSIPHLPESKPLYRTSSYPDKQQELPRFSSEPILVPKSSFTSYPPPGGLSQHASPSHSTGHLNSPYHSAAAQMALSSQNRSHFSNSALQSGALNLGSHFGGNTRQFPTGSHLNQRLQNQLVNQAGLYPGDHSSLLNNMLQQQFHLHNGSVSPHLMTQLQQQQHRLRHPVQRSAGYLSGYQSHLFNAHLSSGSSAINKYDHVLGLADGRDHRPKSTHKGKHGLRHSQHGSDAIQKSDSGSFQFRSKYMTSDEIESILRMQHAVTHSNDPYVDDYYHQACLAKKSSVAKLKHPFCPTQIREIPPRTRANAEPHAFVQVDALGRVSFSSIRRPRPLLEVDPPNTSISSDQNISEKPLEQEPRFAARVAIEDGLCLLLDVDDIDRYLQYNQLQDGGTQLRRRRQVLLEGLATSLQLVDPLGKNGHKVGLAAKDDLVFLRLVSLPKGRKLLAKYLKLLPPGSELTRIVCMTVFRHLRFLFGGLPSDLSASETTNNLAKVVCQCVRGMDLGALSACLAAVVCSAEQPPLRPIGSTSGDGASLILIAVLERATELLTDPHAACNYNMGNRSFWQASFDEFFGLLTKYCMNKYHSIMQSMLIQSTSNMDDVGPDAAKAISREMPVELLRASLPHTDERQRKLLLDFAQHSIPVVGFNSNTGG* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2349 870 MobiDBLite consensus disorder prediction 259 280 - -
Vra5g2349 870 MobiDBLite consensus disorder prediction 103 162 - -
Vra5g2349 870 PANTHER PROTEIN PAT1 HOMOLOG 18 189 - -
Vra5g2349 870 PANTHER PROTEIN PAT1 HOMOLOG 188 861 - -
Vra5g2349 870 MobiDBLite consensus disorder prediction 421 452 - -
Vra5g2349 870 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 188 861 IPR039900 GO:0000290
Vra5g2349 870 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 18 189 IPR039900 GO:0000290
Vra5g2349 870 MobiDBLite consensus disorder prediction 203 280 - -
Vra5g2349 870 MobiDBLite consensus disorder prediction 110 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2349 Vra-Chr5 30354966 30365029 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2349 5 30354966 30365029 Vra5g2349 5 30354966 30365029 ECH