Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1514 ATGGAGGATGTTGAAGACAAGATACCCCCTGTATTCTCTTCAAAAGTTACTGAAGAGACACCACTTGCAGAACATGTTGGAGACAAGCTACTGTCTGAATCTTCTCCAAAAATTGCTAAAGAGACTTCACTACTGGCAGAACTTGTTGGAAACAAGAGACCATCTGAATCTTCTCCAAAAACTGCCGAAGAGATACTCCTGGCTGAGCTTGTTGGAGACAAGCTACCATTGGAAACTTCCCCAAATATTGCTGAAGAACCACTGGTAGAACTTGTTGGAGACAACCAACCATCTGCATCCTCTTCCAAAATGAATGAGACACCACCTGCTGAGTATGTGATAGAGAACTCTGAATCCTCTTCTAAAGTTGCAGAAGAGGCGACACTGGCAGAACATGTTGTCAACAAGCTACCCTCTGAATCCACTACAAAATTTTCTGAAGAGATGATACTGGTAGAACACCCTGAAGAAAACACCGAAGTGATAAAATTACCCAACAATCAATCTTCCACCCAAGCTCCAACTGTCCCACTTAGTAATGCAAAAGTGCAGTCTGACACTCATTTACCATTGGATGGGTTCCCTGAACAAATATTTTTTCCAAATTCTAATGATTTTCAAACTGTAATGCAAGAGGAGACTGTTTCTTTAGTTGATTCAGTTGCAAACCCAGATGCTGCATTTGATGTAACAGAAAAAAGGCAGCAGGTCACTTCAGTTGAAGAATCAAAACCAGGTGCTCTAGAAAATGTTTCTGACGGGCATGCATTGCTGGATAATGTTTCTAATATCACTGCTGACAGTGATGTTAATCATGAGATTAGGCGTTCAACTTCTTCTTCTGAAGCAAAAGATTTGCAAAATGATCACAATGAACTTTTAATGACCATGGGAACGGTTGGTTCACTCCCCCATGACAAGACGTTTGATGAGAAAAAACACATTATTGATACCAGAGCTCCTATTAAATCTGTCAAGCAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGACGCGATCTTGTAGAACATGAGCTTGAAAAGGCACAAGAGGAGATCCCAGAGTACAGAAAACAAGCAGAGGATGCTGAACAGGAAAAAGGCCAAATGCTTAAGGAGTTAGACAGTACAAAGAGATTAATAGAAGAATTAAAACTTAACCTAGAGAGAGCAGAAACAGAAGAGCGTCAGGCAAGACAGGACTCAGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATAGCAGACGAATCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCCAAAGCAAGGTATGCAGCTGCTGTTTCAGATTTAAAAGCTGTGAAAGAGGAGCAGGAAACATTGCAGAAAAATTTTGCTATCTTAGTGAGTGAAAGAGATTTAGCCATTAAGAAAGCTGAAGAGGCCGTTGCTGAATCAAAGGAAGTAGAGAAGTCTGTAGAGGATTTAACTATTGAGCTAATTGCTGCAAAAGAATCATTGGAGACTGCCCACGGTGCACACTTGGAAGCAGAGGAGCAAAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCCCTTGATTGGGAGAAGGAACTTAAAGAGACGGAAGAAGAGCTCCAGAGACTCAACCAGCAAATTTTGTCTGCAAAGGAACTCAAATCTAAATTGGATACAGCCTCTACTTTGCTGATTGATTTGAAAGCTGAATTATCTTCTTATATGGAATCAAAGTTAAAGCAGGAAGGTGACGAAGAAGGAAACTCAAAAGGAGGCCCAGAAGAACCAGAGAAAAAGACCCACACTGACATACAAACAGCAGTTGCATCAGCCAAAAAGGAACTTGAGGAAGTGAATCTTAACATAGAGAAAGCAACCGCAGAGGTTAGTTGCTTGAAGGTAGCTGCTACATCATTAAAATCAGAACTTGAACAGGAGAAAGCAACTCTTGCTGCCATCAGACAAAGGGAGGGAATGGCCTCCATTGCGGTTGCATCTCTGGAAGCTGAATTGGAAAAGACCAGATCAGAAATTGCTTTGGTCCAGATGAAGGAGAAAGAAGCTAAAGAGAAAATGACCGAGCTTCCCAAGAAGCTACAAATTGCGGCTGAAGAGGCTAGTCAAGCCAACTTGCTTTCTCAGGCAGCTCGTGAAGAGCTACAAAAGGTAAAGGCAGAAGCAGAGCAGGCCAAGGCTGGAGTAAGTACCTTGGAAAGTAGATTACTTGCAGCTCAGAAGGAGATAGAGGCTGCAAGGGCGTCTGAACATTTGGCAATAGCGGCAATTAAAGCATTGCAAGAGAGTGAATCAACTAGAAGCAAGAATGCACTGGACCCATCCAAAGGGGTAACACTTTCTCTGGAAGAGTACTATGAGCTTAGCAAACGAGCACACGAGGCAGAAGAGCGGGCCAATATGAGGGTTGCAGCTGCTAATTCTGAAATTGATAAAGCTAAGCAGTCTGAATTGAAAGCCTTTGAAAAGTTGGACGAAGTGAATAGGGAGATAGCTGCAGGAAGGGAATCTTTGAAAGTGGCGATGGAAAAGGCTGAAAAGGCTAAGGAAGGCAAATTGGGCGTAGAGCAAGAATTAAGAAAGTGGAGAGCTGAAAGTGAACAACGAAGAAAGGCGGGAGACTCTGGTCAAGGAGCGGTAAACCAGAGTAAAAGTCCTAGGGGTAGTTTTGAGGGGAGTCATGAAGCAAATAATTTTGAGCGCACTGGTGTTGCAGATAATGCTGCACATCATTTTCCAAGTCCGAAGACTAATGTACATCCAGACTTTGATGAAAGTGGATCATCCCCAGAAATAAAACAAGGGAAAAAGAAGAAAAGGTCACTTTTCCCGAGGGTTTTGATGTTCTTTGCTAGAAGAAAAACACATTCAACCAAGTGA 2916 0.4259 MEDVEDKIPPVFSSKVTEETPLAEHVGDKLLSESSPKIAKETSLLAELVGNKRPSESSPKTAEEILLAELVGDKLPLETSPNIAEEPLVELVGDNQPSASSSKMNETPPAEYVIENSESSSKVAEEATLAEHVVNKLPSESTTKFSEEMILVEHPEENTEVIKLPNNQSSTQAPTVPLSNAKVQSDTHLPLDGFPEQIFFPNSNDFQTVMQEETVSLVDSVANPDAAFDVTEKRQQVTSVEESKPGALENVSDGHALLDNVSNITADSDVNHEIRRSTSSSEAKDLQNDHNELLMTMGTVGSLPHDKTFDEKKHIIDTRAPIKSVKQAVSKFGGIVDWKAHRIQTVERRDLVEHELEKAQEEIPEYRKQAEDAEQEKGQMLKELDSTKRLIEELKLNLERAETEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYAAAVSDLKAVKEEQETLQKNFAILVSERDLAIKKAEEAVAESKEVEKSVEDLTIELIAAKESLETAHGAHLEAEEQRIGTVMARDQDSLDWEKELKETEEELQRLNQQILSAKELKSKLDTASTLLIDLKAELSSYMESKLKQEGDEEGNSKGGPEEPEKKTHTDIQTAVASAKKELEEVNLNIEKATAEVSCLKVAATSLKSELEQEKATLAAIRQREGMASIAVASLEAELEKTRSEIALVQMKEKEAKEKMTELPKKLQIAAEEASQANLLSQAAREELQKVKAEAEQAKAGVSTLESRLLAAQKEIEAARASEHLAIAAIKALQESESTRSKNALDPSKGVTLSLEEYYELSKRAHEAEERANMRVAAANSEIDKAKQSELKAFEKLDEVNREIAAGRESLKVAMEKAEKAKEGKLGVEQELRKWRAESEQRRKAGDSGQGAVNQSKSPRGSFEGSHEANNFERTGVADNAAHHFPSPKTNVHPDFDESGSSPEIKQGKKKKRSLFPRVLMFFARRKTHSTK* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1514 971 MobiDBLite consensus disorder prediction 856 884 - -
Vra5g1514 971 MobiDBLite consensus disorder prediction 1 20 - -
Vra5g1514 971 Coils Coil 438 465 - -
Vra5g1514 971 Coils Coil 836 877 - -
Vra5g1514 971 Coils Coil 477 500 - -
Vra5g1514 971 Coils Coil 808 828 - -
Vra5g1514 971 Coils Coil 713 761 - -
Vra5g1514 971 Pfam Weak chloroplast movement under blue light 313 881 IPR008545 -
Vra5g1514 971 Coils Coil 671 698 - -
Vra5g1514 971 MobiDBLite consensus disorder prediction 856 956 - -
Vra5g1514 971 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 292 968 - -
Vra5g1514 971 MobiDBLite consensus disorder prediction 887 908 - -
Vra5g1514 971 PANTHER WEB FAMILY PROTEIN-RELATED 292 968 - -
Vra5g1514 971 MobiDBLite consensus disorder prediction 584 617 - -
Vra5g1514 971 Coils Coil 615 663 - -
Vra5g1514 971 Coils Coil 533 577 - -
Vra5g1514 971 MobiDBLite consensus disorder prediction 584 609 - -
Vra5g1514 971 Coils Coil 342 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1514 Vra-Chr5 21802101 21808438 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1514 5 21802101 21808438 Vra5g1514 5 21802101 21808438 ECH
Vra6g1865 6 35278937 35282286 Vra5g1514 5 21802101 21808438 PCT