Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1442 ATGACTGAGGGTGGTGACAGTGGTGGTTGCGGTGGCAGTGCCGGTAATAAAAAGACACAACCTGAAGTGGCTTTAGCCCTACCACATCCAGTGAAAGAACAATTACCCGATGTTCAGTATTGCATTAACAGTCCTCCTCCTTGGCAACAAGCAGTGTTATTGGGATTCCAGCATTATATTCTGACTCTTGGTGTGACAGTTCTGATTCCAACTACGATTGTTACTGAAATGGGTGGGGGTCATGCTGAGAAGGCCAAGGTGATACAGAATCTATTGTTTGTTTCTGGAGCAAGCACGCTTCTGCAATCTTGGTTTGGAACACGATTGCCAACCGTAGTTGTTGGTTCATACAGTTTCCTAATACCCACAATGTCAATTGTCCATGCCAAGAGATACAGTTCATATACAGATCCTTATGAGAGGTTCACTCATACAATTAGAGGGATACAAGGCGCCTTGATTGCGAGTGCATGTTTCCATATAGTTGTGGGATTCTTGGGCCTTTGGAGGGGTGCTGTCAGGTTCCTTAGCCCACTTTCTGTTGTCTCTTACGTAACTTTCACTGGACTCGGTCTCTATCATCTTGGATTCCCAATGCTGGCAGAATGTGTTGAAGTGGGGCTTCCAGCACTGATTGTTTTGGTTTTCATCTCACAGTATCTTAATAGATTTATTAGCCCCAACAAGCTTATCAACGGCAGATTTGCGGTGTTGTTTTCGATTGCAAGTGCATGGTTAATTGCACAGATTCTGACTGCAAGCACTATATACAACAACAAGCCAGAAGATACCGAGAAAAGTTGCCGCACTGATCGTTCTGGTCTTGTCAGTTCTTCTAGTTGGGTATATCTCCCTTTTATTCCCTTCCAATGGGGGGCTCCTACCTTCAACTTCGGAGAAGCTTTGGCTATGACAGCAGCTTCTTTTGTTTCTCTTTTTGAGTCTACTGGTGCATTTTATGCCGCGGCAAGGTATGGAAGTGCAACACCCGTGCCACCACATGTTATTGGCCGCGGAGCTGGCTGGGTGGGAGTAGCTTCTTTTTTCAGTGGCGTTTTGGGTTCTGTAACTGGATGTGCGGCATCAGTGGAGAATGCTGGATTATTGGCACTGACTAGAGTGGGAAGCCGAAGGGTCATCCAAATATCAGCTGGCTTTATGATTTTCTTCTCCATATTTGGAAAAGTGGGAGCAATTTTTGCTTCTATACCTTTGCCAATCATAGCAGCATTAAACTGTGTGCTTTTGGGCTATGTCTCTTCTGCAGGTCTTGGTTTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACCAAATTCGTGCTGGGCTCTTCATTCTTCCTCGGCCTCTCCATACCACAATATTTCATAGAAATTTTTCACGTGAAGCATCAACACGGCTGGTTCAATGATATGGTTAGCGTGATCTTTATGTCCCACACAACAGTGGCGGGGTTGATTGCATTCGTTTTGGACACCACACTCACATGCGAAAATGATGCAGCCCATAGGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCAGTGTATATAATGCTGATGGTCGGAACGATGATTTCTATAGATTACCATGCAAACTCAACGACCTCTTTCCCGCTATTTAA 1620 0.45 MTEGGDSGGCGGSAGNKKTQPEVALALPHPVKEQLPDVQYCINSPPPWQQAVLLGFQHYILTLGVTVLIPTTIVTEMGGGHAEKAKVIQNLLFVSGASTLLQSWFGTRLPTVVVGSYSFLIPTMSIVHAKRYSSYTDPYERFTHTIRGIQGALIASACFHIVVGFLGLWRGAVRFLSPLSVVSYVTFTGLGLYHLGFPMLAECVEVGLPALIVLVFISQYLNRFISPNKLINGRFAVLFSIASAWLIAQILTASTIYNNKPEDTEKSCRTDRSGLVSSSSWVYLPFIPFQWGAPTFNFGEALAMTAASFVSLFESTGAFYAAARYGSATPVPPHVIGRGAGWVGVASFFSGVLGSVTGCAASVENAGLLALTRVGSRRVIQISAGFMIFFSIFGKVGAIFASIPLPIIAALNCVLLGYVSSAGLGFLQFCNLNSFRTKFVLGSSFFLGLSIPQYFIEIFHVKHQHGWFNDMVSVIFMSHTTVAGLIAFVLDTTLTCENDAAHRDSGLQWWEKFSVYNADGRNDDFYRLPCKLNDLFPAI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1442 539 Pfam Permease family 50 455 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra5g1442 539 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 10-RELATED 15 538 - -
Vra5g1442 539 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 15 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1442 Vra-Chr5 21137082 21141398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1442 28 538 Organic Solute Cotransporters AT1G65550 59.962 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1442 - - gmx:100800316 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1442 5 21137082 21141398 Vra5g1442 5 21137082 21141398 ECH
Vra5g1442 5 21137082 21141398 Vra6g1795 6 34391636 34394885 PCT