Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1425 ATGAAGGAGGACCCGGAGAACGATAAAGACAAAGACGCGAGGATTTGGGGAGCTTTACTCTTTGGCTTAATTGGCGCCACCTTCACTACCTTTGCGGTCGGTCCGCTGCGGAGGAGTGTTGATTGGTGCTATGTTCAGCTAACGAGGACACAGTCACATAAAGGACAGAGAGGTGGGTCGTTCCGAACATCATTTCAAGAAGAGGCTTGGAGGAGGCACAATAAGCGAATGCAAGAGGAGTACGAGGAGGAGATGGAAAGAGTGGAACGAATAAGGCGTATGCAAAGCGTGTTTAACAGAGAAAGGAACAAGTATAAAAGAAGCTACGAGAGCTGGAGGGAAAACGGTCATGGTGCATATCATCAGCATTACCAGAGAGATGATTGGTACTGGAAGACTGATACATCCTTTAGAGATCGGAGGACCAATTATCGAGAAACTCCAAGAGAGACTGGAAACTATGCATTATCACATCACTACTCAATTTTGGGTCTTGACAGGTTTAGAAAAACGCCGTATTCGGATGCTGAGATTAAGACAGCATTTAGAACTAAGGCAAAGGAGTATCATCCTGATCAAAACCAGGATAATATTGAGGCTGCTGAGGCGAAGTTCAAGGAAGTGATGACTTCATACGAGGCCATAAAAAAGGAAAGAAGAAACTAA 666 0.4489 MKEDPENDKDKDARIWGALLFGLIGATFTTFAVGPLRRSVDWCYVQLTRTQSHKGQRGGSFRTSFQEEAWRRHNKRMQEEYEEEMERVERIRRMQSVFNRERNKYKRSYESWRENGHGAYHQHYQRDDWYWKTDTSFRDRRTNYRETPRETGNYALSHHYSILGLDRFRKTPYSDAEIKTAFRTKAKEYHPDQNQDNIEAAEAKFKEVMTSYEAIKKERRN* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1425 221 Coils Coil 198 218 - -
Vra5g1425 221 Gene3D DnaJ domain 152 221 IPR036869 -
Vra5g1425 221 SUPERFAMILY Chaperone J-domain 155 218 IPR036869 -
Vra5g1425 221 PRINTS DnaJ domain signature 182 197 IPR001623 -
Vra5g1425 221 PRINTS DnaJ domain signature 200 220 IPR001623 -
Vra5g1425 221 ProSiteProfiles dnaJ domain profile. 158 220 IPR001623 -
Vra5g1425 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 221 - -
Vra5g1425 221 SMART dnaj_3 157 220 IPR001623 -
Vra5g1425 221 Pfam DnaJ domain 159 219 IPR001623 -
Vra5g1425 221 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 221 - -
Vra5g1425 221 CDD DnaJ 159 213 IPR001623 -
Vra5g1425 221 Coils Coil 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1425 Vra-Chr5 20966185 20971168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1425 - - gmx:100812371 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1425 5 20966185 20971168 Vra5g1425 5 20966185 20971168 ECH
Vra6g1776 6 34042707 34048048 Vra5g1425 5 20966185 20971168 PCT