Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1424 ATGATGTCGCGGAGACCTGTGAATCTGTCTCGGCGATTTGGAGACAGCGGAGGTGGATTGTTTTCATCGTCGAAATCAAAGACTTCGCCAGCTTTGTCGGTTGGGCTCATAATTGTGGGAGGACTGTTTCTCATTGGCTATGTTTACAAGGGCTCAGGTGGATTTGGCAGCCGTTTGGAGTCTTTCAGCAGGCTTCAAGGTGATTCTTTGTGTACTGGAGAGGTCCCACGAGCAATTCCCATTTTGAAGAAAGCATATGGTGATAGCTTACACAAAGTTTTGCATGTTGGCCCTGATACTTGCTATGTGGTCTCTAATTTGCTAAAAGAGGAGGAAACTGAAGCCTGGGGTATAGAACCTTATGATATAGAGGATGCTGATGCTAATTGCAAAGCACTTATTCGCAAAGGCATTGTTCGTATGGCTGATATCAAGTTTCCTCTTCCATACAGGCCAAAAGCTTTCTCTCTTGTAATCATTTCCGATGCCCTTGATTTCTTATCTCCCAGATACCTTAACAAAACTCTTCCGGATTTGGCAAGGGTATCAACTGATGGAATAGTGATCTTTACTGGTTTTCCAGATAATAAAAAGGCTAAGGGTGCAGACGTTTCTAAATATGGAAAAACGGCTAAGATGAGGAGTTCATCCTGGTGGGTCCGGTATTTCCTTCAGATTAACTTAGAGGAGAATGATGCTGCTTCCAAGAAGTTTGCACAGGCTTCAACTAAGAGTTCATATATTCCAAATTGCCAGATATTCCACTTGAAGTCTCTCAATTGA 783 0.4291 MMSRRPVNLSRRFGDSGGGLFSSSKSKTSPALSVGLIIVGGLFLIGYVYKGSGGFGSRLESFSRLQGDSLCTGEVPRAIPILKKAYGDSLHKVLHVGPDTCYVVSNLLKEEETEAWGIEPYDIEDADANCKALIRKGIVRMADIKFPLPYRPKAFSLVIISDALDFLSPRYLNKTLPDLARVSTDGIVIFTGFPDNKKAKGADVSKYGKTAKMRSSSWWVRYFLQINLEENDAASKKFAQASTKSSYIPNCQIFHLKSLN* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1424 260 Gene3D Vaccinia Virus protein VP39 79 254 IPR029063 -
Vra5g1424 260 PANTHER PROTEIN, PUTATIVE-RELATED 2 259 - -
Vra5g1424 260 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 2 259 IPR044689 GO:0008168|GO:0045488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1424 Vra-Chr5 20962497 20966001 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1424 K23871 - gmx:100815049 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1424 5 20962497 20966001 Vra5g1424 5 20962497 20966001 ECH
Vra6g1775 6 34037712 34042517 Vra5g1424 5 20962497 20966001 PCT