Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1422 ATGGACATTGCTGCTCTTTTAACCTCTGCTGGAATTAATATTGCCGTGTGCGTGGTGCTCTTTTCACTCTATTCAATATTAAGAAAACAGCCCAGCAATGTCAATGTGTACTTTGGAAAAAGGTTAGCTTCCAGGAGTTCGAAAAGCCGGGATCTATGTTTGGATAGATTTGTTCCCTCTCCTACTTGGGTAATGAAAGCATGGGAAACAACTCAAGAGGAAATGTTGACTACCGGTGGCTTGGATGCTGTGGTTTTTAGCAGGATGGTTGTGTTCAGGCTTTGGGCTCATTGTCTCGCATTATACATCATAACTTTAACAGCTTGTACTCTTCTTTACTTTGAATACAAATGCATTACTAATTTGCGGCTACTACATATTACCTCATCTCAGCCAAATCCTAGTCATTTTGCAATTCTTGTCAGAGGAATACCCTGGTCTCCAGATCAATCATACTGCGAAACAGTGAAAAAGTTTTTTTCATTTTATCACCCCTCAACATATTTGTCGCACCAAATTGTGTATAAGTCTGGTTCAGTCCAGAAACTGAAGGATGATGCAGAATATATGTGTAAAATGCTCAGTTCTGGTTGTGGTTCAATGGAACAGACGTGTAAGCCAAGTTTTGCGCAATGTTACTTTTGTGGAGGATCCACTAATTCTTTTAAGATTATTTCTAATGAAACTGATAGTATACACGGAAGAACTGGCTACTCTGACGTGCATTTAAATGCAAGAAAAAAGGAATGTGCAGCTGCCTTTGTGTTCTTTAAAAGCCGTTATGCTGCTCTTACCGTTGCTCAAAGTCTTCAAACATCAAATCCTATGCTATGGGTCACAGACCTAGCTCCTGAACCACAGGATGTTTACTGGTCCAACCTTTGCATACCATACAAGCAACTTTGGATCCGTAAGATAACTACATTTGCGGCTTCTGTCACCTTTGTCCTTGTATTCCTTATCCCTGTCACATTCGCCCAAGGATTGACTCAACTGGACAAGCTTGAGAAAATGTTCCCTTTTCTCACAGGAATGCTTCAAAAGAAATTTGTGATTCAGCTGGTGACTGGTTACTTACCAAGTGTGATTTTGGTTTTATTTTTATATGCTGTTCCACCAGTGGTGATGCTATTTTCAACAATGGAGGGATGTGTTTCTCGTAGTGAAAGGAAGACGAGTGCATGCTCCAAATTTTTGTACTTCACAATTTGGAATGTTTTTTTTGTTAATGTTTTTGCCGGGTCTGTTATCAGCCAACTCGCAGTATTTAGTAGTCTAACAGAATTACCTGCCCAACTTGCCAAGGCTGTTCCTGCGCAGGCTACCTACTTCACAACATATGTTTTATCATCGGGTTGGGCAAGTTTGGCATTTGAAATTATGCAACTCTTTCCGCTTTTTTGCAATCTGTTCCAAAGATTCATACTTGGGTATAATGAGGATACGATCAATGGCTTCCTAACTTTTCCATACCATACAGAAGTTCCAAGGATCTTACTGTTTGGATTCCTTGGGTTCACCTGTTCTATTCTGGCACCCCTAATATTGCCCTTCTTGTTGTTCTACTTTGTACTGGCATACCTCGTTTACCGAAACCAGATTCTGAATGTATATATTAAAAAATATGATAGCGGGGGACAGTTATGGCCCATTGCTCACAACACAACGGTCCTTTCGTTGCTCGTCGCTCAAGTTATTGCACTTGGGGTGTTTGGAATAAAACAGTCACCAGTTGCATCAGGGTTTACCTTTCCATTGCTGATCTGCACTGTACTATTTCACCAATATTGTAGGCAACGATTTCTTCCAATATTTAAGAACAATGCAACACAGGTTCTTATCGACATGGATAGGAGAGATGAGCGTTGTGGGAGAATGGAACAGATTTATGAACAGCTGACTTCAGCGTATTGCCAGTTTTCTAGTTCTAATCAATCCGAATGTTTCAGCAGTCAAGGGGAAAGAGAAGATGTTCGAACTCCGCAAGATATGGAGAAAGCCAACGAAATGACAGAAGATATATCATGGCCACCAGTTATTCATAGTTTCGATAAACCGGTAAAAGGGGGGAAGTAA 2076 0.4051 MDIAALLTSAGINIAVCVVLFSLYSILRKQPSNVNVYFGKRLASRSSKSRDLCLDRFVPSPTWVMKAWETTQEEMLTTGGLDAVVFSRMVVFRLWAHCLALYIITLTACTLLYFEYKCITNLRLLHITSSQPNPSHFAILVRGIPWSPDQSYCETVKKFFSFYHPSTYLSHQIVYKSGSVQKLKDDAEYMCKMLSSGCGSMEQTCKPSFAQCYFCGGSTNSFKIISNETDSIHGRTGYSDVHLNARKKECAAAFVFFKSRYAALTVAQSLQTSNPMLWVTDLAPEPQDVYWSNLCIPYKQLWIRKITTFAASVTFVLVFLIPVTFAQGLTQLDKLEKMFPFLTGMLQKKFVIQLVTGYLPSVILVLFLYAVPPVVMLFSTMEGCVSRSERKTSACSKFLYFTIWNVFFVNVFAGSVISQLAVFSSLTELPAQLAKAVPAQATYFTTYVLSSGWASLAFEIMQLFPLFCNLFQRFILGYNEDTINGFLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFVLAYLVYRNQILNVYIKKYDSGGQLWPIAHNTTVLSLLVAQVIALGVFGIKQSPVASGFTFPLLICTVLFHQYCRQRFLPIFKNNATQVLIDMDRRDERCGRMEQIYEQLTSAYCQFSSSNQSECFSSQGEREDVRTPQDMEKANEMTEDISWPPVIHSFDKPVKGGK* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1422 691 MobiDBLite consensus disorder prediction 649 671 - -
Vra5g1422 691 Pfam Cytosolic domain of 10TM putative phosphate transporter 137 293 IPR027815 -
Vra5g1422 691 MobiDBLite consensus disorder prediction 652 670 - -
Vra5g1422 691 Pfam Calcium-dependent channel, 7TM region, putative phosphate 304 571 IPR003864 GO:0016020
Vra5g1422 691 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 94 666 IPR045122 GO:0005227
Vra5g1422 691 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 2 94 IPR045122 GO:0005227
Vra5g1422 691 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 2 94 - -
Vra5g1422 691 PANTHER ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN 94 666 - -
Vra5g1422 691 Pfam Late exocytosis, associated with Golgi transport 6 90 IPR032880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1422 Vra-Chr5 20924325 20941910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1422 K21989 - gmx:100789875 1164.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1422 5 20924325 20941910 Vra5g1422 5 20924325 20941910 ECH
Vra6g1774 6 34024044 34033718 Vra5g1422 5 20924325 20941910 PCT