Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1411 ATGTTTAGATTCAATGTTCAAGCAAAACCATTATCAGAAACAGAAATTGAAGCCAAATTGAAGCAACTCAACAAGCCTGCTGTCAAAACCATCAAGAGTGAAGATGGAGATATTATTGATTGTGTCAATATTTATGACCAACCTGCTTTTGATCATCCAGCCTTAAAAAACCATACTATCCAGATGATGCCTGATTATCTGCTACAATTGAAAAATTCAAGCACAGTAGAAGAAGATTCAGAGTCACAGATATTTCAGACATGGCAGAAGAGTGGAAGTTGTCCACAAGGAACCATCCCTATTCGTAGAATTCTAAAGGAAGATTTACTCAGAGCTGCTTCTCTCGATAGCTTTGGCCAGAAATTCCCACAGCACTACGATAATTCAACAGGCCAAGAAGACGGATATGTTCCCCCAACTCGATCGTCAGCATTTCTTCTGACAGTGGGATTCAACTACATCGGAGCACAAGCAGACATCAACATTTGGAATCCAAAGGTTGCTCAGACAAACGAGTTCACCACAGCTCAAATTTGGNTCAAGAACAGCAACGGTCCCTATTTTTCAAGCGTTGAATCAGGGTGGACGGTGAATCGCAAGCTATATGGTGACTTAGCCACCCGACTTTTCGCCTACTGGACTAGGGATTCATACAGATCAACTGGGTGCTTCGATCTTACATGTTCAGGATTTGTGCAAACAGGGCAAGTAGCGCTTGGTGCTAGCATAGGACCTGTATCATTATTTTATAGAGAACAGTATGACATTAACGTTGGAATGTTCCTGCCAAACTCGGGAAATTGGTATCTGAAAGTGAAGAACAATATGGCAGTGGGTTATTGGCCAGCTGAAATAGTGGGGTTATTGAGACACAGTGCGACATCGGTTGAGTGGGGGGGACAAGTATCAAGCACGAATATAAGAAAGAAAAGGCCTCACACCACAACACAAATGGGTAGTGGAGAGTTTGCAAATGGTCGATATCAGCAAGCATGCTACATGAAAAACATAAAGATTATGGATTATTCACTTCAGCTCAAGTATCCCAGAGATGTAACTCCAGTGGCTCAAGAGCCCTTTTGTTACAGTGCCGTCAATGATGCGAGGCGTGGGGTGGAACCTATGTTTTATTTTGGAGGCCCTGGTCGAGACCTACCCTACTGTCCGTGA 1170 0.4299 MFRFNVQAKPLSETEIEAKLKQLNKPAVKTIKSEDGDIIDCVNIYDQPAFDHPALKNHTIQMMPDYLLQLKNSSTVEEDSESQIFQTWQKSGSCPQGTIPIRRILKEDLLRAASLDSFGQKFPQHYDNSTGQEDGYVPPTRSSAFLLTVGFNYIGAQADINIWNPKVAQTNEFTTAQIWXKNSNGPYFSSVESGWTVNRKLYGDLATRLFAYWTRDSYRSTGCFDLTCSGFVQTGQVALGASIGPVSLFYREQYDINVGMFLPNSGNWYLKVKNNMAVGYWPAEIVGLLRHSATSVEWGGQVSSTNIRKKRPHTTTQMGSGEFANGRYQQACYMKNIKIMDYSLQLKYPRDVTPVAQEPFCYSAVNDARRGVEPMFYFGGPGRDLPYCP* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1411 389 Pfam Neprosin 171 381 IPR004314 -
Vra5g1411 389 Pfam Neprosin activation peptide 30 126 IPR025521 -
Vra5g1411 389 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 7 384 - -
Vra5g1411 389 Gene3D - 161 257 - -
Vra5g1411 389 PANTHER ASLB (DUF239)-RELATED 7 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1411 Vra-Chr5 20824704 20829905 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1411 - - vra:106760448 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1760 6 33804922 33808239 Vra5g1411 5 20824704 20829905 PCT