Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g00130 ATGAAGCAGTTTCTCACCAAATCCCTATCTGTTTGCTCTTTGCCAACCACCCTTCAACAAATTGCTTCTCATCAATACAAAGGTGTTGCAAAGGTTGTGCTAAAGAAGGCGAAGACACAACTCTTTAAGGATGGCAACCCAATGGTATATAGTGGAGCCGTTGATAGAATCATCGGCAGGCCGCCTCCTAAAACCGGCGATATTGTACTGGTTTCAGACGGGACTGAGAAACCAATAGGGTGGGGCTTGTACAACTCTGTTTCTATGTTCTGTGTTCGCCTCATGCAGCTTGAAGACGAAGCTACTAGGTTCTTTGATTCAGCATGTGCATTGAACATGGAGAAACTGCTCGAAAAAAGAATTGACGCAGCTGTCGAATTGCGTACAAGGTTGGATCTTCCTTCCGTCCATACGAATGCATATCGTCTGATCAATAGTGAGGGTGACAGACTATCAGGATTGATAGTTGATGTCTTTGGAGATGTAGCTGTAGTAGCTTCATCTGCCGCTTGGGTTGAGAAATACAAATCAGAGATAGAGGCGCGCATCAGGAAAATCAACTATATCAATCATATAAACTGGAGGCCATCGATTGATATTTTAAAGGAAGACGGAGTTAATGTGTCGGATTCAAAGGAAATCCTTTCATCTACTTGTCCTGAAAGAACCAAGATTATGGAAAATGGAATTGTGTACACAATTTCACTGAAAGGACAGAAGACTGGATTTTATGCAGATCAGCGCGAGAGTCGTGAGTTTATATCAAAAATTTCATATGGTCAAAAGGTTCTTGATCTTTGTTGCTATAGTGGTGGGTTTTCTCTAAATGCAGTGCATGGAGGTGCTCTAAATGTCACCGGTGTTGACTCATCAATGCCAGCTCTGGAACTTGCTAAGGAAAATGTTGTACTTAACAGAATTGATCCTGGAAGAATATCCTTTTTAAAAGAAGATGCAACTGAATTCATGAAGGCTGCCCTTCTGAGAGATGAATCTTGGGATATTGTCATCATTGATCCTCCTAAACTGGCACCTTCGAAAAAGGCTCTGCATGGTGCATCTGGTATGTACAGAAATTTGAATTCTTTGGCCATGCAACTGACAAAACGAGGTGGTCTTCTGATGACCTGTTCCTGTTCTGGAGCTGTGACCCAAAGTGGTATATTCCTGCGTATTCTACAGGGTGCAGCATCTATGGCAAAGAGAAAAATAACTGTTCTAAGAGATGCCGGAGCTGCTTGTGATCATCCTATTGATCCATCATATCCAGAAGGTGCATACCTTACCAACATTCTGTTGAGAGTTTCATGA 1311 0.4218 MKQFLTKSLSVCSLPTTLQQIASHQYKGVAKVVLKKAKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVSDGTEKPIGWGLYNSVSMFCVRLMQLEDEATRFFDSACALNMEKLLEKRIDAAVELRTRLDLPSVHTNAYRLINSEGDRLSGLIVDVFGDVAVVASSAAWVEKYKSEIEARIRKINYINHINWRPSIDILKEDGVNVSDSKEILSSTCPERTKIMENGIVYTISLKGQKTGFYADQRESREFISKISYGQKVLDLCCYSGGFSLNAVHGGALNVTGVDSSMPALELAKENVVLNRIDPGRISFLKEDATEFMKAALLRDESWDIVIIDPPKLAPSKKALHGASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFLRILQGAASMAKRKITVLRDAGAACDHPIDPSYPEGAYLTNILLRVS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g00130 436 SUPERFAMILY PUA domain-like 31 99 IPR015947 -
Vivi7g00130 436 SMART pua_5 30 126 IPR002478 GO:0003723
Vivi7g00130 436 Pfam S-adenosylmethionine-dependent methyltransferase 211 394 IPR019614 GO:0008168
Vivi7g00130 436 Pfam PUA-like domain 32 95 IPR041532 GO:0003723
Vivi7g00130 436 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 431 IPR029063 -
Vivi7g00130 436 CDD PUA_RlmI 30 100 IPR041532 GO:0003723
Vivi7g00130 436 Gene3D PUA domain 29 100 IPR036974 GO:0003723
Vivi7g00130 436 Gene3D Vaccinia Virus protein VP39 223 436 IPR029063 -
Vivi7g00130 436 Gene3D RNA methyltransferase domain (HRMD) like 113 221 - -
Vivi7g00130 436 CDD AdoMet_MTases 262 377 - -
Vivi7g00130 436 CDD RlmI_M_like 116 205 - -
Vivi7g00130 436 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 17 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g00130 Vivi-Chr7 8584751 8588636 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g00130 - - gmx:100796633 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g00130 7 8584751 8588636 Vivi7g00130 7 8584751 8588636 ECH