Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05468 ATGAAGGAAGATGAAGGTGATGACGATAGGAAAATCAGCAACGATGATAAATTTGTTCAAGATATCAAACTTTGGGGAGTTTTCCTCTTCGGATTAATCGGCGCTACCGCCACCACCTTCGCCCTGTCCAGGTCGTTGAAAGGAGGGAGTGGCAGTTCTTTTCGAACGGCTTTTCAAGAAGAAGCGTGGAAGAGGTACAATAAGCGAATGCAAGAGGAGTACGAGGAAGAGATGGAGAGAGTGGAAAGAATAAGGCGTATGCAAGAGGTGTTTAATAGAGAAAGGAATAAGTATAGACGAAATCCCGAGAACTGGAAGGAAAATGGTTCTGGTACATATCATCAGAATTTCCCAAGAGATGATTGGTATTGGAAGGCTGAACAAACCTTCAGAGACCAGTGGAAAAATTACCCAAGGGAAAATGGAAGCATAAATTATTCATTATTATCACACCACTACTCAGTTTTGGGTCTCGACAGGTCTAGAACGACACCATATACAGATGCTGAAATTAAGACAGCATTTAGGACCAAGGCAAAGCAGTATCATCCTGACCAGAACCAAGAGGATAGAGTGGCTGCTGAGGCTAAGTTCAAAGAAGTAATGAGTTCATATGAGGCCATACAACAAGAAAGAAAGAATCATAGTCTGTAA 654 0.4205 MKEDEGDDDRKISNDDKFVQDIKLWGVFLFGLIGATATTFALSRSLKGGSGSSFRTAFQEEAWKRYNKRMQEEYEEEMERVERIRRMQEVFNRERNKYRRNPENWKENGSGTYHQNFPRDDWYWKAEQTFRDQWKNYPRENGSINYSLLSHHYSVLGLDRSRTTPYTDAEIKTAFRTKAKQYHPDQNQEDRVAAEAKFKEVMSSYEAIQQERKNHSL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05468 217 Coils Coil 67 87 - -
Vivi4g05468 217 Gene3D DnaJ domain 126 216 IPR036869 -
Vivi4g05468 217 PRINTS DnaJ domain signature 175 190 IPR001623 -
Vivi4g05468 217 PRINTS DnaJ domain signature 193 213 IPR001623 -
Vivi4g05468 217 PRINTS DnaJ domain signature 153 171 IPR001623 -
Vivi4g05468 217 SUPERFAMILY Chaperone J-domain 151 213 IPR036869 -
Vivi4g05468 217 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 215 - -
Vivi4g05468 217 CDD DnaJ 152 206 IPR001623 -
Vivi4g05468 217 ProSiteProfiles dnaJ domain profile. 151 213 IPR001623 -
Vivi4g05468 217 SMART dnaj_3 150 213 IPR001623 -
Vivi4g05468 217 Pfam DnaJ domain 152 213 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05468 Vivi-Chr4 189081689 189085629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05468 - - gmx:100804936 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05468 4 189081689 189085629 Vivi4g05468 4 189081689 189085629 ECH
Vivi4g05468 4 189081689 189085629 Vivi3g01752 3 28387507 28392338 PCT