Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05428 ATGGATTTCATGAAAGTCTTCGATCAAACCGTTCGAGAAATAAAAAGAGAAGTGAATCTGAAAGTGCTTAAGGTTCCCGAAATCGAACAGAAGGTGTTGGATGCAACTGATGATGAACCTTGGGGTCCTCATGGTACTGCTCTGGCAGAGATTGCAACGGCTACCAAAAAATTTACTGAATGTCAGCTGGTTATGAATGTCCTTTGGACAAGATTGAGTGAAACTGGAAAGGATTGGCGATATGTATACAAGGCATTAGCTGTTATAGAGTATTTGGTATCACATGGATCTGAACGTGCAGTTGATGACATTATAGAGCATACTTTTCAGATCTCTGCACTTTCTAGTTTTGAATATGTTGAGCCCAGTGGGAAGGATGTGGGACTCAATGTGAGGAAGAAGTCAGAAAACATTGTGTCCCTTTTGAATGATAGAGAAAAAATAAGTCAAATCAGAAATAAAGCTGCTGCAAACCGTGACAAGTATGTTGGAGTTTCATCTAGTGGAATCACATACAAATCTGGGACAACCTCGTTTAGTAGTGGGAGTTCCCAGAGCAGTAGTAAATATGGAGGTTTCGGTTCAAGAGACAATGATAGGTATAGTGATAGCTACGGAGACAAGGGGCGCTATGATGAAGATAAAGTAGACAACGATTACTCAGGAAAATCACGCCATGGTGTCTCAAGTAACGATCAAGAAAACTCCTTCAAGAAGGGTTCTGCACGGTCTGTCAGTAAAAGTAAGGAGAAGATATCATCAAGAGCTTCAAAGTCATCTGCAAATGCAAGTTCAGTTCCTTCCCAAAGTACAAGTGTAACTGCAAATGATACTGAGGATGACTTTGATGATTTTGATCCAAGAGGAACGTCTACTAAGACTACAGCTGGGAGCTCAAACCAGGTTGATCTCTTTGGACAAGATTTGATTGGTGACCTCATGGATGCTCCAACATCTGTTTCTGTGGAAAAACCAGCAACTAATGATGTGTCAGAGGTTGATCTCTTTGCAGATGCGGCATTTGTATCAGCACCACCACAAATGGACAGAGGAGCTAGTTCTCAACCACAGGAAGAAGTGGATCTCTTTTCTTCACAACCAGCCATTTCTTCAGCTACACCAACAGTTGACTTGTTTTCCATTCCTGCACCGGCTGTGCAGCCTGACAGCAAGTCGGAAAACTCTGTTCCTGTGAATAACAGCACTTTTGATCCCTTCGCTTCTGTTCCACTAAATAATTTTGATGGATCTGATCTTTTTGGCGATTTTACTTCTCAATCTGATACTGTATCTTCACAGCCCTCACCTAATGCTATTACCGATGGTAGTACAAGTGCTAAATCTTTAGCGGTCGTTTCACCTAAAAAAGATGCTTTTCAGGTGAAATCTGGCATTTGGGCTGATTCCCTAAGCCGTGGGTTGATTGATCTCAATATATCTGCTCCCAAAAAAGTATCCCTTGTAGATGTTGGAATTGTGGGTGGATTGAATGATGGGGCAGATGAAAGAGAGAAAGGCCCTCCAGCTGCATTTTACATGGGTAGAGCCATGGGTTCAGGATCTGGCCTTGGTATGTATGGTGGCACTCCTTCACAGCCAACAACTGGAGACGACATGTTTTCGAACTTTGGCAGCCAAAATTATCAATTTGGTGGGTTCCAAAAGTAA 1668 0.4221 MDFMKVFDQTVREIKREVNLKVLKVPEIEQKVLDATDDEPWGPHGTALAEIATATKKFTECQLVMNVLWTRLSETGKDWRYVYKALAVIEYLVSHGSERAVDDIIEHTFQISALSSFEYVEPSGKDVGLNVRKKSENIVSLLNDREKISQIRNKAAANRDKYVGVSSSGITYKSGTTSFSSGSSQSSSKYGGFGSRDNDRYSDSYGDKGRYDEDKVDNDYSGKSRHGVSSNDQENSFKKGSARSVSKSKEKISSRASKSSANASSVPSQSTSVTANDTEDDFDDFDPRGTSTKTTAGSSNQVDLFGQDLIGDLMDAPTSVSVEKPATNDVSEVDLFADAAFVSAPPQMDRGASSQPQEEVDLFSSQPAISSATPTVDLFSIPAPAVQPDSKSENSVPVNNSTFDPFASVPLNNFDGSDLFGDFTSQSDTVSSQPSPNAITDGSTSAKSLAVVSPKKDAFQVKSGIWADSLSRGLIDLNISAPKKVSLVDVGIVGGLNDGADEREKGPPAAFYMGRAMGSGSGLGMYGGTPSQPTTGDDMFSNFGSQNYQFGGFQK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05428 555 MobiDBLite consensus disorder prediction 174 193 - -
Vivi4g05428 555 PANTHER EPSIN/ENT-RELATED 4 530 - -
Vivi4g05428 555 SUPERFAMILY ENTH/VHS domain 7 150 IPR008942 -
Vivi4g05428 555 Pfam ENTH domain 27 147 IPR013809 -
Vivi4g05428 555 SMART enth_2 26 152 IPR013809 -
Vivi4g05428 555 MobiDBLite consensus disorder prediction 426 446 - -
Vivi4g05428 555 FunFam Clathrin interactor 1 18 165 - -
Vivi4g05428 555 Gene3D - 19 165 IPR008942 -
Vivi4g05428 555 MobiDBLite consensus disorder prediction 174 300 - -
Vivi4g05428 555 ProSiteProfiles ENTH domain profile. 20 152 IPR013809 -
Vivi4g05428 555 MobiDBLite consensus disorder prediction 255 276 - -
Vivi4g05428 555 MobiDBLite consensus disorder prediction 200 222 - -
Vivi4g05428 555 CDD ENTH 28 144 - -
Vivi4g05428 555 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05428 Vivi-Chr4 188114330 188120564 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05428 K12471 - gmx:100809198 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05428 4 188114330 188120564 Vivi4g05428 4 188114330 188120564 ECH