Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05421 ATGCAATCGAGGGCTGTGGCATCTGAAGAAGGAAAATCAAGAGGGTTATCACTAGGATCAATGCGTTTATTTGTTGTTTTCATTGCTCTATGTGTTGTGTTTTCTGTGATAAGCATATATACTATTAAGCATTTTGGAATTAAGAGTGTGGTTACTACAATGAGTTCAACTTTTCAGCCATGTGTAGAGGAACATGGTGGTTTGGAACAATGGATTAAACCTCCTTCAAATCTGATCCATAATATGAGTGATAGTGAACTTCTTTGGAGAGCTTCTTTGGTTCCTAAGATTAAAAATTACCCTTTTCGAAGAGTTCCAAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCTCTTTGGGAGAGGTTTCTCAAAGGGCATCAGAGTCTTTATACTATTTATATTCATCCTTTTCCTTCTTATCAAGCTCACTTTCCTCCTTCGTCTGCTTTCTATAAGAGGCAAATCCCTAGTCAGATTGCCGAGTGGGGAAGAATGAGCATGTGCGACGCGGAAAGAAGACTACTTGCCAATGCACTACTCGACATCTCCAACGAGTGGTTTATCCTACTGTCCGAATCATGCATCCCTCTCTACAAATTCAGCACAGTCTACAACTACTTGTTGAAATCCAAATTCAGCTTCGTCGGAGCATTCGACGATCCCAGTCCATACGGAAGAGGACGCTACAACCCAAACATGGCTCCTCTAGTAGAAATTACAAAATGGCGTAAAGGCTCTCAATGGTTCGAAGTAAACCGAAAGCTCGCCGTCAACATTGTTGAAGACACCGCGTTTTATCCCAAGTTCGAACAATACTGTAGACCAGCATGTTACGTCGACGAGCACTATTTTCCCACCATGTTAACAATTCAAGCAGGGAGTGCGTTGGCGAACCGAAGCATAACTTGGGTGGACTGGTCGAGAGGTGGGCCCCACCCGGCGACATTCGGAAAAGCGGATATTACAAAGGAGTTTTTCAGTAGAGTTCTTGGAGATCAGAAATGCTTATATAATAATAGAAACTCTTCGGTTTGTGTTCTTTTTGCTAGAAAATTTGCTCCTAGTGCTTTGGAACCTTTGTTAGATATGGTGAAGTCAAAAGTCTTGGACTTCTGA 1131 0.4191 MQSRAVASEEGKSRGLSLGSMRLFVVFIALCVVFSVISIYTIKHFGIKSVVTTMSSTFQPCVEEHGGLEQWIKPPSNLIHNMSDSELLWRASLVPKIKNYPFRRVPKIAFMFLTKGPLPLAPLWERFLKGHQSLYTIYIHPFPSYQAHFPPSSAFYKRQIPSQIAEWGRMSMCDAERRLLANALLDISNEWFILLSESCIPLYKFSTVYNYLLKSKFSFVGAFDDPSPYGRGRYNPNMAPLVEITKWRKGSQWFEVNRKLAVNIVEDTAFYPKFEQYCRPACYVDEHYFPTMLTIQAGSALANRSITWVDWSRGGPHPATFGKADITKEFFSRVLGDQKCLYNNRNSSVCVLFARKFAPSALEPLLDMVKSKVLDF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05421 376 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 35 366 IPR044174 GO:0016757
Vivi4g05421 376 Pfam Core-2/I-Branching enzyme 108 334 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05421 Vivi-Chr4 188010169 188014976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05421 - - gmx:100785919 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05421 4 188010169 188014976 Vivi4g05421 4 188010169 188014976 ECH