Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05415 ATGGACTTTTCTCAACTCTCCACTCTTCTCCTTTTCACCTTCCTCGCCGCCGTCTCCGCTGCCCGTGATCTCCCCGGCGACTATCTCCGATTGCCTTCTCAAACCTCCAGATTCTTCCGTCAACCTGAAAACGATGACAACGAAAAGGGAACTAGGTGGGCGATTTTGCTCGCTGGTTCTAATGGTTACTGGAATTATAGACATCAGGCTGATGTTTGTCATGCGTATCAATTATTGAGGAAAGGTGGATTGAAGGAAGAGAATATTATTGTTTTCATGTATGATGATATTGCTTCGAATGAAGAGAATCCAAGGCCTGGTGTCATAATTAACAAACCTGATGGGGATGATGTTTATGCAGGAGTTCCGAAGGATTATACTGGTGATGATGTACATGCTGACAATTTCTATGCTGCTTTACTTGGAAATAAATCCGCTCTTACAGGTGGGAGTGGGAAAGTTGTGGATAGCGGTCCCAATGATCATATTTTTGTATACTACACTGATCATGGTGGTCCGGGGGTTCTTGGTATGCCTGTTGGTCCTTACTTGTACGCATCTGATCTGAATGAAGTGTTGAAGAAAAAACATGCTTCTGGAACATATGAGAGCCTAGTATTTTATCTAGAGGCATGTGAATCTGGGAGTATCTTTGAAGGACTTCTTCCAAAAGATCTCAATATCTACGCGACAACAGCTTCAAATGCGGAAGAAAGTAGTTGGGGAACATATTGCCCCGGGGATAACCCTCCCCCACCCCCAGAGTACTCAACTTGCTTGGGTGACCTATACAGTGTTGCTTGGATGGAAGACAGTGACGCACACAATTTGCGAACTGAAAGTTTGCAACAGCAATATAAATTGGTTAAGGATAGGACTATTAATGGAGCATACTATGGATCTCATGTGATGGAATACGGTGATGTAGGTCTTAGCAACAATCTTCTCTATCTATATTTGGGTACAAATCCTGCTAATGAAAATAATTCCTTTGTGGATGAAACTGAAAACTCCTTGAAATTGAGAACACCTTCAGTCAACCAAAGGGATGCCGATCTCATCCATTTCTGGGAAAAGTTCCGCAAAGCACCAGAGGGTTCTTCGCGGAAAAATGAAGCTGAGAAACAAGTTTTGGAAGCAATGTCTCACAGGAAGCATATAGACAACAGTGTGAAACTGATTGGGAAGCTCTTATTTGGCATTGAAAAGGGTACTGAAGTGCTCAACACTGTTAGACCTGCTGGATCACCACTTGTTGATAACTGGGACTGCCTCAAAACCATGGTAAAGACTTTTGAGACACATTGTGGATCCCTGTCTCAGTATGGTATGAAGCATATGAGGTCTTTCGCGAACATCTGCAATGCAGGAATACCGAATGAGCAAATGGCCGAGGCCTCAGCACAAGCTTGTGTCAGTATTCCTGCCAACCCCTGGAGTTCTCTGCAAGGAGGTTTCAGTGCATAG 1467 0.4369 MDFSQLSTLLLFTFLAAVSAARDLPGDYLRLPSQTSRFFRQPENDDNEKGTRWAILLAGSNGYWNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGDDVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDLNEVLKKKHASGTYESLVFYLEACESGSIFEGLLPKDLNIYATTASNAEESSWGTYCPGDNPPPPPEYSTCLGDLYSVAWMEDSDAHNLRTESLQQQYKLVKDRTINGAYYGSHVMEYGDVGLSNNLLYLYLGTNPANENNSFVDETENSLKLRTPSVNQRDADLIHFWEKFRKAPEGSSRKNEAEKQVLEAMSHRKHIDNSVKLIGKLLFGIEKGTEVLNTVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEQMAEASAQACVSIPANPWSSLQGGFSA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05415 488 FunFam Vacuolar-processing enzyme beta-isozyme 50 345 - -
Vivi4g05415 488 Gene3D - 348 476 IPR046427 -
Vivi4g05415 488 FunFam Vacuolar-processing enzyme beta-isozyme 348 476 - -
Vivi4g05415 488 Gene3D - 50 344 - -
Vivi4g05415 488 PIRSF AE 1 488 IPR043577 GO:0004197|GO:0051603
Vivi4g05415 488 CDD legumain_C 350 471 - -
Vivi4g05415 488 PANTHER HEMOGLOBINASE FAMILY MEMBER 24 472 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PRINTS Hemoglobinase (C13) cysteine protease signature 153 172 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PRINTS Hemoglobinase (C13) cysteine protease signature 202 218 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PRINTS Hemoglobinase (C13) cysteine protease signature 125 140 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PRINTS Hemoglobinase (C13) cysteine protease signature 78 107 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PRINTS Hemoglobinase (C13) cysteine protease signature 53 77 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 PIRSF Legumain 1 488 IPR001096 GO:0006508|GO:0008233
Vivi4g05415 488 Pfam Peptidase C13 family 52 321 IPR001096 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05415 Vivi-Chr4 187940693 187944493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05415 K01369 - gmx:547700 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05415 4 187940693 187944493 Vivi4g05415 4 187940693 187944493 ECH