Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g02599 ATGAAACCCTCCATGTTTCATATCTTTGTCTTGTTCTTCATTCTAACCTATGTTCAAGGTCGTTTTGTGGTGGAGAAAAATAGCATAACGGTTCTGTCACCACATAAACTACGAGGTAAAAAAGATGGTGCCATAGGAAACTTTGGAATTCCAAATTATGGAGGCTATATTCTTGGATCGCTTGTTTATCCTGACAAAGGCTCTCATGGTTGTCAAGTCTTTGAAGGTGATAAGCCTTTCAAGTTTCGGTCTAATCGCCCAACTATTGTTCTTCTTGATCGTGGAGAATGTTATTTTGCCTTAAAGGTATGGCATGCACAGCTGGCTGGAGCTGCAGCGGTGTTAGTTACTGACAGTATTGATGAGTCACTGATAACTATGGATTCGCCTGAGGAGAGCACCGATGCGGACGGATACATAGAAAAGATTGTAATTCCGTCGGTTCTAATTGAAAAGTCCTTTGGCGATTCATTGAAGGATTCTCTAAGTAACAAAGACGAAGTTTTGATAAGAATAGACTGGCGCGAATCTGTTCCTCACCCTGACAATCGGGTCGAGTATGAGTTCTGGACCAACAGCAACGACGAATGCGGCCCTCGTTGCGATGAACAGATGAATTTTGTGAAGAATTTCAAGGGTCATGCTCAGATTCTTGAGAGAGGTGGGTATACATTGTTTACTCCACATTATATAACATGGTTTTGTCCAAAGCCGTTTGTTGAAAGCAGCCAATGTAAGTCTCAATGTATAAACCACGGAAGATATTGCGCGCCGGATCCTGAGAAGGATTTTGGTGAGGGATATGAAGGGAAGGATGTAGTGTATGAGAATTTGAGACAGCTTTGTGTTCATAGAGTGGCGAACGAGAGTAACCGTTCGTGGGTGTGGTGGGATTATGTGACAGATTTTCATGTTAGGTGTTCTATGAAGGAGAAAAAATATAGCAAAGATTGTGCTGAAGTTGTCATGAAATCATTAGATCTTCCTATTGAGAAAATCAAGAAATGTGTTGGTGATCCTGAAGCTGATGTCGAGAATGAAGTTCTAAAGATCGAACAAACAGCACAGATTGGAGGAGGATCTCGTGGCGATGTAACCATTTTGCCAACATTGATTTTAAACAATGTCCAGTATAGAGGAAAATTGGAAAGAACATCTGTTTTGAAGGCGATATGTGCAGGATTTAAGGAGACTACTGAACCTCAAGTTTGTTTAAGTGGAGATATCGAAACTAACGAGTGTCTAGAAAGAAGAAATGGAGGATGCTGGCAAGACAGAAGTGCTAATGTAACTGCTTGCAAGGATACTTTCAGGGGAAGAGTTTGCGAATGTCCTGTTGTGGAAGGTGTTCAGTATAAGGGTGATGGTTATACAACATGTGAAGCTTTTGGACCTGCAAGATGCTCTATAAACAATGGAGGCTGTTGGTCAGAAACTAGAAATAAAATTACTTTCTCAGCTTGTTCAGAATCCAAGGTAAATGGCTGTCACTGCCCAGAAGGATTTGTTGGAGATGGTATCAAATGTGAAGATATCGATGAATGTAAGGAAAAAAGTGCTTGTCAGTGTGATGGCTGCAGCTGTAAGGACACTTGGGGTGGTTACGATTGTAAATGCAAAGGCAATCTTCTTTACATCAAGGAACAAGATATTTGTATTGCAGAAAGAAATGGATCAAAATTTGGAAAAGTACTCGCATTTGTGGTCATAGCAGTTGTTGCGATAGCTGGTCTAGCTGGTTACGTATTCTACAAGTATAGACTCAGGTCTTACATGGACTCCGAGATCATGGCGATCATGTCACAATACATGCCATTGGACCAGCAAAACAATGTAGTCCATGCTGAATCAGAGCCTTTACGACAAGGCAATGTGTAA 1878 0.4111 MKPSMFHIFVLFFILTYVQGRFVVEKNSITVLSPHKLRGKKDGAIGNFGIPNYGGYILGSLVYPDKGSHGCQVFEGDKPFKFRSNRPTIVLLDRGECYFALKVWHAQLAGAAAVLVTDSIDESLITMDSPEESTDADGYIEKIVIPSVLIEKSFGDSLKDSLSNKDEVLIRIDWRESVPHPDNRVEYEFWTNSNDECGPRCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVESSQCKSQCINHGRYCAPDPEKDFGEGYEGKDVVYENLRQLCVHRVANESNRSWVWWDYVTDFHVRCSMKEKKYSKDCAEVVMKSLDLPIEKIKKCVGDPEADVENEVLKIEQTAQIGGGSRGDVTILPTLILNNVQYRGKLERTSVLKAICAGFKETTEPQVCLSGDIETNECLERRNGGCWQDRSANVTACKDTFRGRVCECPVVEGVQYKGDGYTTCEAFGPARCSINNGGCWSETRNKITFSACSESKVNGCHCPEGFVGDGIKCEDIDECKEKSACQCDGCSCKDTWGGYDCKCKGNLLYIKEQDICIAERNGSKFGKVLAFVVIAVVAIAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAESEPLRQGNV 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g02599 625 Gene3D - 19 181 - -
Vivi4g02599 625 PANTHER PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 5 611 - -
Vivi4g02599 625 FunFam vacuolar-sorting receptor 1 404 461 - -
Vivi4g02599 625 SMART egfca_6 511 553 IPR001881 GO:0005509
Vivi4g02599 625 CDD EGF_CA 511 540 - -
Vivi4g02599 625 Gene3D Plasmodium vivax P25 domain 387 560 - -
Vivi4g02599 625 FunFam Vacuolar-sorting receptor 1 19 181 - -
Vivi4g02599 625 SUPERFAMILY PA domain 87 168 IPR046450 -
Vivi4g02599 625 ProSitePatterns Calcium-binding EGF-like domain signature. 511 537 IPR018097 GO:0005509
Vivi4g02599 625 Pfam PA domain 59 158 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g02599 Vivi-Chr4 125426975 125431156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi4g02599 4 622 Miscellaneous Gene Families AT1G30900 70.128 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g02599 - - pvu:PHAVU_009G243800g 1139.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g02599 4 125426975 125431156 Vivi4g02599 4 125426975 125431156 ECH