Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01755 ATGAAGTCCATGAATGACAGTAGTAATAACAACAACAACTCTGATGACAGAAACAATAATCATAACAACAATAACAACAACTGGTTGGGTTTCTCACTCTCACCCCATCATCATCATCATTACCAACAAACCCAAACTTCTTCAGTTTCCAACACTGTTCCTGTTCCCACTGCTTTCTATTTATCCCCTTCTCATTTCACCAACTCACCTATCTGCTATGGTGTTCCTGAAAATCATAACTTTCATTCATCTTTGTCTGTTATGCCTCTTAAATCAGATGGCTCTCTTTGTATCATGGAAGCTCTCGGTAGATCACAATCACAAGTGATTGTGTCATCTTCATCTCCAAAACTTGAAGACTTTCTAGGTGGTGCAACAATGGGAACTCATGATGAATATGGTAGCCATGAGAGAGATGCAGCAATGGCCTTAAGCTTAGACAGCATTTACTACAATAACCAACAAAATGCAGATCCTCATCAACAACAACAAAGCCACATGACATCACATCCTTACTATGCAGCACTTGGTTTCCATGGCATGTTTCAATCACCATTAGAGGTAGAATCAAAAGAAACAACAAACCATGTTGATGTTTGTAGCTCCCAATCCCATATTCCTCAAAACTGGTTCTCTCAAAGAGACTATTCTTCTGCTTCTCATGCTTCTCATGTTTCTCAGTCTCTTGAGCAACAAATGAACACAAACATGGGAAACAACAATGGTGGTGGTGGTTCTATTGTTGGTGGTTCTGTTGGGTGTGGTGAGTTACAATCTCTGAGCCTATCAATGAGTCCTGGCTCTCAATCCAGCTGTGTGACTGCTCCTACACAGATCTCACCTTCTGGAACTGAATCAGTAACCATGGAAGCTAAGAAAAGAGGTGCTGCTAAGCTTGGACAGAAGCAACCTGTTCATAGAAAATCCATAGACACTTTTGGACAGAGAACTTCACAGTATAGAGGTGTCACTAGGCATAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAAGAAGGTCAAACAAGAAAAGGAAGACAAGTTTATTTGGGAGGTTATGATATGGAAGAGAAAGCAGCAAGAGCTTATGATCAAGCAGCACTTAAATATTGGGGTCCTTCAACTCATATAAACTTCCCACTAGAAAATTATCAAACTCAACTTGAGGAAATGAAGAACATGACAAGGCAAGAATATGTTGCACATTTGAGAAGAAAAAGCAGTGGATTTTCCAGGGGTGCTTCAATGTACAGAGGAGTGACAAGACACCACCAACATGGTAGGTGGCAAGCAAGGATTGGAAGAGTTGCTGGTAACAAAGATCTTTATCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCAGCAATAAAATTCCGTGGTGCGAATGCGGTTACGAATTTCGATATATCTAAATACGATGTCGAAAAAATTATGGCTAGCAATACTCTTCTGTCTGGTGAGCATGCAAGAAGAATCAAACAAAATGTTCCTAGAACCGATGTTCACGAATGTAACGATACAAATACAAACGCAACGAGCCAGAACATCGGAGAAACTGATCAAGCGCGAAACAGCAATGAAAGTACTGATTCTAAATGGAAGATGGTGTCAAATGGTTGTGACCAAAAGAACTCTGCTGGAAATTATAAGAATTCTGATTTTTCGATGTCTTTACAAGACCTAGTTGGTATTGAGTCAGTTGGTTTGGATGATTCGACAAAGATCGGTAATCATTTCTCGAATCCGTCTTCATTGGTGACAAGCTTAAGCTCTTCTAGAGAAGCTAGTCCTGAAAAAACTGCTCCTTCTCAGCTCTTTCCAAAGCCTTCAATGGAAACAAAGATTGATTCTAACATTGGTGTTAGTTCTTGGTTTCCTTCACAAGTAACAACTCAAATGAGACCAACTTCTTCTATCAATTTGTCACATTTTCCTGTTTTTGCTGCATGGAATGATGCTTAG 1995 0.3985 MKSMNDSSNNNNNSDDRNNNHNNNNNNWLGFSLSPHHHHHYQQTQTSSVSNTVPVPTAFYLSPSHFTNSPICYGVPENHNFHSSLSVMPLKSDGSLCIMEALGRSQSQVIVSSSSPKLEDFLGGATMGTHDEYGSHERDAAMALSLDSIYYNNQQNADPHQQQQSHMTSHPYYAALGFHGMFQSPLEVESKETTNHVDVCSSQSHIPQNWFSQRDYSSASHASHVSQSLEQQMNTNMGNNNGGGGSIVGGSVGCGELQSLSLSMSPGSQSSCVTAPTQISPSGTESVTMEAKKRGAAKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYQTQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISKYDVEKIMASNTLLSGEHARRIKQNVPRTDVHECNDTNTNATSQNIGETDQARNSNESTDSKWKMVSNGCDQKNSAGNYKNSDFSMSLQDLVGIESVGLDDSTKIGNHFSNPSSLVTSLSSSREASPEKTAPSQLFPKPSMETKIDSNIGVSSWFPSQVTTQMRPTSSINLSHFPVFAAWNDA 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01755 664 MobiDBLite consensus disorder prediction 266 287 - -
Vivi3g01755 664 Pfam AP2 domain 422 471 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 Pfam AP2 domain 319 377 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 CDD AP2 318 385 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 ProSiteProfiles AP2/ERF domain profile. 421 479 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 ProSiteProfiles AP2/ERF domain profile. 319 385 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 MobiDBLite consensus disorder prediction 1 49 - -
Vivi3g01755 664 CDD AP2 420 481 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 Gene3D AP2/ERF domain 421 481 IPR036955 GO:0003700|GO:0006355
Vivi3g01755 664 Gene3D AP2/ERF domain 318 387 IPR036955 GO:0003700|GO:0006355
Vivi3g01755 664 MobiDBLite consensus disorder prediction 591 610 - -
Vivi3g01755 664 SUPERFAMILY DNA-binding domain 318 387 IPR016177 GO:0003677
Vivi3g01755 664 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 111 561 - -
Vivi3g01755 664 FunFam AP2-like ethylene-responsive transcription factor 420 481 - -
Vivi3g01755 664 FunFam AP2-like ethylene-responsive transcription factor ANT 318 387 - -
Vivi3g01755 664 PRINTS Ethylene responsive element binding protein signature 320 331 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 PRINTS Ethylene responsive element binding protein signature 461 481 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 MobiDBLite consensus disorder prediction 266 289 - -
Vivi3g01755 664 MobiDBLite consensus disorder prediction 512 545 - -
Vivi3g01755 664 SUPERFAMILY DNA-binding domain 420 481 IPR016177 GO:0003677
Vivi3g01755 664 MobiDBLite consensus disorder prediction 591 621 - -
Vivi3g01755 664 SMART rav1_2 421 485 IPR001471 GO:0003700|GO:0006355
Vivi3g01755 664 SMART rav1_2 319 391 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01755 Vivi-Chr3 28434964 28438746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01755 15 502 AP2-EREBP Transcription Factor Family AT4G37750 54.580 3.05e-165 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Vivi3g01755 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01755 K09285 - qsa:O6P43_015953 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01755 3 28434964 28438746 Vivi3g01755 3 28434964 28438746 ECH
Vivi4g05474 4 189188619 189192053 Vivi3g01755 3 28434964 28438746 PCT