Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01752 ATGAAGAAAGACGCTAGAAACGACGAATCAGAAGACCCGAAACTATGGGGAGCGATTCTGTTCGGCTTGATTGGCGCCACCGCCACTACTCTCGTCTTCGGTCAGCTACGGAAGACTGCTGAATGGATATCTCTGATATCTAGGTCTCAAGGATGGAAAGGAAAAAGTGGTGGTTCTTATAGAACGGCTTTTCAGGAAGAGGCGTGGAGAAAACACAATAAACGAATGCAAGAGGAGTATGAAGAGGAGATGGAGAGAGTTGAACGAATAAGGCGTATGCAAAACGTGTTTAACAGAGAAAGAAATAAATACAAAAGAGGCTATGAAAGCTGGAAGGAACAAGGTCCTAGTCCATATCATCAACATTTCCAAAGAGAAGATTGGTATTGGAAAACTGATACTTCATACAAGGACAGGAGGACTAATTATCGAGAAACTCCAAGAGAGAGCAGAAACTATGCATTGTCACATCACTACTCAGTTTTGGGTCTTGACAGGTTTAGGAAAGCACCATATTCAGATGCTGAAATTAAGTCAGCATTTAGGACAAAGGCAAAGGAGTATCATCCTGATCAGAACCAGGATAATAAAGACATTGCAGAAGCCAAGTTCAAAGAAGTGATGACTTCATTTGAGGCCATAAAACAGGAAAGAAATAACCAAAATCTGTAA 672 0.4122 MKKDARNDESEDPKLWGAILFGLIGATATTLVFGQLRKTAEWISLISRSQGWKGKSGGSYRTAFQEEAWRKHNKRMQEEYEEEMERVERIRRMQNVFNRERNKYKRGYESWKEQGPSPYHQHFQREDWYWKTDTSYKDRRTNYRETPRESRNYALSHHYSVLGLDRFRKAPYSDAEIKSAFRTKAKEYHPDQNQDNKDIAEAKFKEVMTSFEAIKQERNNQNL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01752 223 PRINTS DnaJ domain signature 199 219 IPR001623 -
Vivi3g01752 223 PRINTS DnaJ domain signature 181 196 IPR001623 -
Vivi3g01752 223 Pfam DnaJ domain 158 219 IPR001623 -
Vivi3g01752 223 SUPERFAMILY Chaperone J-domain 156 218 IPR036869 -
Vivi3g01752 223 SMART dnaj_3 156 219 IPR001623 -
Vivi3g01752 223 Coils Coil 66 93 - -
Vivi3g01752 223 Gene3D DnaJ domain 148 223 IPR036869 -
Vivi3g01752 223 CDD DnaJ 158 207 IPR001623 -
Vivi3g01752 223 ProSiteProfiles dnaJ domain profile. 157 219 IPR001623 -
Vivi3g01752 223 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01752 Vivi-Chr3 28387507 28392338 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01752 - - mtr:25490002 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01752 3 28387507 28392338 Vivi3g01752 3 28387507 28392338 ECH
Vivi4g05468 4 189081689 189085629 Vivi3g01752 3 28387507 28392338 PCT