Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01726 ATGAACATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATCGTTGTGTGTGTGGTGCTCTTTTCACTTTATTCAATCTTAAGAAAACAACCCAGCAATGTTAATGTGTATTTCGGAAGAAAACTAGCCAATCGTGGTGGTTCGAAAAACCTTGATCTTTCGTTCGAAAGATTTGTTCCGTCTCCTACATGGGTTATGAAAGCATGTGATACAACTCAAGAGGAGCTTCTTGATATTGGGGGTTTGGATGCCGTGGTTTTTAGTCGGATGCTCGTTCTCAGTATTCGAGTATTTTCTGTTGCTGCTATCATCTGCACAATTTTAGTGCTTCCAGTGAACTATTATGGTCATGACAGGATACGTAAAGACCTACCTTTTGAGTCACTGGAAGCCTTTACCATTGAGAATGTCCAGGAAGGATCCAGATGGCTTTGGACTCATTGTCTTGCATTATACATCATATCGTTGACAACATGCTCACTTCTTTACTTTGAATACAAGACCATTACTAATTTATGCCTAGTACATATCACTGGATTGCCTCCAAAACCAAGTCAGTTTACGATTCTTGTCCGAGGAATACCTTGGTCCCCCGATGATTCATACTGTGAAGCTGTGAAGAAGTTTTTCACATATTACCACCCATCAACATATTTGTCACACCAAATAGTGTACAAGTGTGGTGCTGTTGAGAAGATAAAGGATGATGCGGAATATATATGTAAGATGTTGGGTGATGGTGTGGAACACAGTTGTAAGCCAAGCATGGTGCAATGTTACTTTTGTGGAGGAACCAATAGTTTTAAGATAATTGCTAATGAAACGGATAGTATACATTCGAGAACAGGCTTAACTGACGTGCATATAATAGCAAGAAAAAAGGAATGTGCAGCCGCCTTCGTGTTCTTTAAGACTCGGTATGCTGCTCTTATGGCTGCTCGAAATCTTCAAGCTACAAATCCTATGTTATGGGTCACAGATCAAGCTCCTGAACCACGTGATGTTTACTGGTCCAACCTTTGCATACCTTACAAGCAACTTTGGATTCGAAAGATATTTACATGGGTGGCTTCTTTCACCTTCGTGTTACTATTTCTCATTCCTGTCACATTTGCACAAGGCTTGACTCAATTAGACAAGCTTGAGAAAATGTTCCCTTTCTTAACAGATATACTTCAAAAGAAATTTACGGTTCAATTGGTGACTGGTTATTTGCCAAGTGTGATTTTGGTTTTATTTTTAATTGGTGTTGGACCAATGATGATGTTACTTTCAGCAGTGGAGGGGCCAATTTCTCGTAGTAGTAGGAAGAGAAGTGCATGCTACAAAGTTTTGTATTTCACTATTTGGAATGTTTTTTTTGTCAATGTTTTTGCCGGGTCTGTTATCAGTCAACTCTCGGTGTTTACAAGTATAACAGAACTACCTGCCCAACTGGCCAAGGCAGTTCCAACGCAGGCTACGTTCTTCACAACATATGTTCTATCATCAGGGTGGGCAAGTCTAGCTTTTGAGATTATACAACCGTTTCCTCTTTTCTGTAACATATTCCAAAGGCTAGTACTCTGCTCTGGGCAAGATTCATATAATGGCACCCTAACTTTTCCTTACCATACAGAAGTTCCAAGAATATTGCTATTTGGTTTTCTAGGGTTCACATGTTCTATTCTTGCACCCCTGATACTGCCATTTTTACTGTTCTACTTTTTCCTCGCGTACATTGTATACCGTAACCAGATTCTCAATGTTTATATTACAAAATACGATGGTGGCGGACAATTATGGCCTATTGCCTTCAACACGACAATCTTTTCATTACTTGTGGCACAAATTATTGCACTAGGGGTGTTTGGACTAAAACAATCATCAATTGCATCTGCATTTACCATTCCGTTGTTGATTGGTACTGTTCTATTTAACCAATATTGTAGGCAACGATTTCTTCCAGTATTCAAGAACAATGCAGCACAGGTTTTTATTGACATGGATCACAGAGATGCAAATTGTAGAAGGATGGATGAGATTTATGATCAATTGCACTCAGCATACTCCCAATTCAGTACTAACTCTACTCAATCTGGATGCTTCGGTTATCCAGGGGACAGAGAACGTGCCCAGAGTCGTCCGATTCCCATTGATATGGAGAGAGGCAAAGAATCCATCAAACAAGATATGTCATGGGCAATTCATCGATAG 2196 0.3966 MNIAALLTSAGINIVVCVVLFSLYSILRKQPSNVNVYFGRKLANRGGSKNLDLSFERFVPSPTWVMKACDTTQEELLDIGGLDAVVFSRMLVLSIRVFSVAAIICTILVLPVNYYGHDRIRKDLPFESLEAFTIENVQEGSRWLWTHCLALYIISLTTCSLLYFEYKTITNLCLVHITGLPPKPSQFTILVRGIPWSPDDSYCEAVKKFFTYYHPSTYLSHQIVYKCGAVEKIKDDAEYICKMLGDGVEHSCKPSMVQCYFCGGTNSFKIIANETDSIHSRTGLTDVHIIARKKECAAAFVFFKTRYAALMAARNLQATNPMLWVTDQAPEPRDVYWSNLCIPYKQLWIRKIFTWVASFTFVLLFLIPVTFAQGLTQLDKLEKMFPFLTDILQKKFTVQLVTGYLPSVILVLFLIGVGPMMMLLSAVEGPISRSSRKRSACYKVLYFTIWNVFFVNVFAGSVISQLSVFTSITELPAQLAKAVPTQATFFTTYVLSSGWASLAFEIIQPFPLFCNIFQRLVLCSGQDSYNGTLTFPYHTEVPRILLFGFLGFTCSILAPLILPFLLFYFFLAYIVYRNQILNVYITKYDGGGQLWPIAFNTTIFSLLVAQIIALGVFGLKQSSIASAFTIPLLIGTVLFNQYCRQRFLPVFKNNAAQVFIDMDHRDANCRRMDEIYDQLHSAYSQFSTNSTQSGCFGYPGDRERAQSRPIPIDMERGKESIKQDMSWAIHR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01726 731 Pfam Calcium-dependent channel, 7TM region, putative phosphate 350 617 IPR003864 GO:0016020
Vivi3g01726 731 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 5 690 IPR045122 GO:0005227
Vivi3g01726 731 Pfam Late exocytosis, associated with Golgi transport 6 165 IPR032880 -
Vivi3g01726 731 Pfam Cytosolic domain of 10TM putative phosphate transporter 186 339 IPR027815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01726 Vivi-Chr3 27937379 27942701 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01726 K21989 - gmx:100789875 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01726 3 27937379 27942701 Vivi3g01726 3 27937379 27942701 ECH
Vivi3g01742 3 28250503 28255809 Vivi3g01726 3 27937379 27942701 PCT